Methylacidimicrobium sp. AP8: MTHMO_0881
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Entry
MTHMO_0881 CDS
T06915
Name
(GenBank) PAS domain S-box
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
meap
Methylacidimicrobium sp. AP8
Brite
KEGG Orthology (KO) [BR:
meap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meap03000
]
MTHMO_0881
Transcription factors [BR:
meap03000
]
Prokaryotic type
Helix-turn-helix
Other families
MTHMO_0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS_4
PAS
PAS_8
PAS_9
HTH_8
AAA_5
AAA
Mg_chelatase
HTH_30
IstB_IS21
AAA_2
AAA_3
AAA_16
PAS_7
PAS_3
MCM
DUF815
TsaE
AAA_30
AAA_7
PIF1
Motif
Other DBs
NCBI-ProteinID:
CAB4243219
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Position
I:complement(870317..872173)
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AA seq
618 aa
AA seq
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MSRSDRSFSSSTLPFPWTDLLLDQLPEALFILDPGHRVLFWNRACARMTGLCAEEVLHTD
RHREAFSPERLPTLADLLLDQELDRLSELYPAAIPTRFSTDNIRIDHWCSFPSGERRYLA
TQAVLLSDPSGKVVAAVQTHRDRTAPRLSEERLAESEARLSAILGSSMDALLCFREDLRL
QLFNRAAERLFGIGRADALGRPVDFFLSPRCRPVFCRFLTLCGAESDPEPIWIPEGLHGL
REGREEFPIQATLTATRVGGHPLFTLSVRDVGALRGAEKAIQRLRLENEYLQEKLSREEE
IGEFLTESPNGRAVLRQIEQVAPTDATVLLQGETGTGKELLARAIHRKSRRSGAILVSVN
CAALPSELVESELFGHEKGAFTGAVQERKGRFELADQGTLFLDEIGELPLSTQAKLLRVL
QDGKFERVGGTRTLRTDVRLIAATNRRLEEDVRKGRFRSDLFYRIHVFPIEIPPLRERPR
DIPLLAHAFLRRFSAKLGKPAVALGAGALERLAAYSWPGNVRELQNIIERAVILSTGPLV
EIDPLENPSSFAPPAASPAPLARRLQKIEQQQIREALEQSRWRISGPLGAATRLGLHPNT
LRYRMRKLGLLPSSPGSK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatccgatcggagcttttcttcgagcacccttcccttcccctggaccgacctc
cttctcgaccagcttccggaagctctcttcatcctcgatcccggccaccgggtcctcttc
tggaaccgggcgtgcgcgcgcatgaccggcctctgcgccgaggaggttctgcacaccgat
cggcatcgggaagccttttctcccgagcgcctacctacgctggccgatcttcttctcgac
caggagctcgaccgcctttccgagctttacccggcagcgattccgactcgcttttccacg
gacaacatccgcatcgatcactggtgctcgttcccttccggggaacggcgctacctggcg
acccaggcggtgctcctttccgatccgtccggaaaggtcgtggcggccgtccagacccac
agggaccggaccgctccgcgcctttccgaggaacgcctggcggagagcgaggcgcgtctg
tccgccatcctgggctcttcgatggatgcgctcctctgctttcgggaggatctccgcctt
caactcttcaacagggcggccgagcgcctcttcggcatcggccgggccgatgcgctcggg
cggcctgtcgatttctttctctccccgcgatgccgcccggtcttttgccggtttttgacc
ctctgcggtgccgagagcgatccggagccgatctggatcccggaggggctccacggcctc
cgggaaggtagggaagagtttccgattcaagccaccctgacggcaacccgcgtcggcggc
cacccgctcttcaccttgagcgtccgcgacgtgggcgcgctccgcggcgccgagaaagcg
attcaacgcctgcggctcgagaacgagtatctgcaggagaagctctcccgggaagaggag
atcggagagtttctcacggaatcccccaacgggcgcgcggttctccggcaaatcgagcag
gtcgctccgaccgacgccacggtcctgctccaaggggagacgggcaccggcaaggagctt
ttagcgcgtgccattcaccgcaaaagccggcgcagcggggcgatcctcgttagcgtcaat
tgcgccgcgctcccttcggagctggtcgaaagcgagctcttcggccatgagaaaggtgcg
tttaccggagcggtacaggagcgcaagggaagattcgagctcgcggatcaagggacgctt
ttcctcgatgagatcggggagctcccgctttcgacgcaagccaagcttctccgcgtcctt
caagacggaaaattcgagcgggtcggcggcacccggacactgcggaccgacgtgcgcctc
atcgccgcgaccaaccgccgccttgaagaggacgtccggaaggggcgcttccgctccgac
ctcttctaccggatccacgtcttcccgatcgaaatccctcccctgcgggagcgaccccga
gatattccccttctggcccacgctttcctccggcgcttctcggctaagctggggaagccc
gccgtcgccttgggcgccggcgcgctggaacgactcgcggcctattcctggcccgggaac
gttcgggagctgcagaacattatcgagcgggccgtgatcctctccaccggtcctttggtg
gagatcgatcccctcgagaatccctcttccttcgccccgcctgccgcttcgcctgctccc
ctcgctcgccgcctccagaaaatcgagcagcagcagatccgcgaagctctcgagcagagc
cgctggcgtatctccggcccgctgggggcggctacccgtctgggccttcacccgaatacc
ctccgataccggatgagaaagctcggcctcctcccctcctctccaggatccaaataa
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