Methylacidimicrobium sp. AP8: MTHMO_1423
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Entry
MTHMO_1423 CDS
T06915
Symbol
udgB
Name
(GenBank) Type-5 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meap
Methylacidimicrobium sp. AP8
Pathway
meap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTHMO_1423 (udgB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meap03400
]
MTHMO_1423 (udgB)
Enzymes [BR:
meap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MTHMO_1423 (udgB)
DNA repair and recombination proteins [BR:
meap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTHMO_1423 (udgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAB4243761
UniProt:
A0A7R8QHR1
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All DBs
Position
I:complement(1363351..1364139)
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AA seq
262 aa
AA seq
DB search
MRGEAERRRLGEGAPPTSCIAEIEKEVVACRRCPRLVAWREEAAAHPPKRYAGFRYWARP
VPGFGDPQARLLLVGLAPAAHGGNRTGRIFTGDRSGDWLFRALHRFGFANQAISRDRDDG
LQLFDCFVTAAVRCPPPENRPSPAERRNCYPFLARELDALVRIRVLIALGGLAFATLLRW
VRQRWPEEAASSLPRSRTTFAHGAEFTLPEGRTLLASYHPSQQNTFTGRLTEAMFDAVFS
RARALLEAGREGTLSGGESVKS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgcggggagaggcggagcggcggcggctcggggagggggctccgcccacttcgtgtatc
gcggagatcgaaaaggaggtggtcgcctgccgccgctgcccgcgtctggtcgcgtggagg
gaggaggcggccgcgcaccctcccaagcgctatgcagggttccgttattgggcccggccg
gttccgggattcggcgacccgcaggcccgccttctcttggtcggcttggctcccgcggct
cacggtggaaaccggaccggcaggatctttaccggagatcggagcggagactggctcttt
cgcgctctccatcgcttcggctttgcgaaccaagcgatctcccgcgaccgcgacgacggc
ctgcaactcttcgactgcttcgtgaccgccgccgtccgttgccctccgccggagaaccgg
ccgtcacccgccgaacggcgcaactgctatccctttctcgctcgggaactcgacgccctc
gtcagaatccgggtcttgatcgcactaggcggattggccttcgcaaccctgctccgttgg
gtgcggcagcgctggccggaggaggcggcctcctccttgccgcgcagccggactacgttc
gcccacggagcggaattcaccctcccggaagggcgaaccctgctcgcctcctaccacccg
agccagcagaacaccttcaccggtcgcttgaccgaggcgatgttcgacgcggtcttctcc
cgcgcgcgtgcgctgctcgaagccggccgcgaaggaaccctttccggcggcgaaagcgtc
aaaagttga
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