Methylacidimicrobium sp. AP8: MTHMO_1673
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Entry
MTHMO_1673 CDS
T06915
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
meap
Methylacidimicrobium sp. AP8
Pathway
meap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTHMO_1673 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meap03019
]
MTHMO_1673 (rhlE)
Enzymes [BR:
meap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTHMO_1673 (rhlE)
Messenger RNA biogenesis [BR:
meap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTHMO_1673 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CAB4244011
LinkDB
All DBs
Position
I:1590309..1591619
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AA seq
436 aa
AA seq
DB search
MSSSLSFRSFPLGTKIWQAVEEAGYARPTPIQAAAIPLILQGRDLIGIAQTGTGKTAAFT
LPILAKLCPEGNIPARSGTRALILSPTRELAAQIEQNARTYGKHLPLRIASVHGGVRERP
QVAALRSGVDLVVACPGRLLDLLEQQHGNLARLEFLVFDEADRMLDMGFLPSIRQIMRWV
SRKRQTLLFSATCSPEIETLARDFLSAPQIVRIGRRADPAQAVVQSVYEVAREQKAELLC
RLLQAEELRSVLVFSRTKHGADRIGRVLERAGIPTATMHADRSQGQRTRALEAFKAGAVR
VLVATDIAARGIDVDGISHVINYDFPATPEDYVHRIGRTGRAEATGDAISFVAREELGAL
RALERLLGRTIERKQIAGFAPEGCSGGSSAGGQQSPASPEHRPAGRSRASRADRRGRYRS
GGRGSSRHEPRSFRPA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttctctctcctttcgtagcttccccttgggaaccaaaatctggcaggcggtc
gaagaggccgggtacgcccggcccactccgatccaagcggcggcgattcccctcattctc
caaggccgcgacctgatcggcatcgcccagacgggaaccggaaagaccgcggccttcacc
ctgccgattctcgccaagctctgcccggaggggaacatccccgcccgcagcggcacccgt
gcgctgatcttaagcccgacccgggagctggcggcgcagatcgagcaaaacgcccggacc
tacgggaagcacctgcccctgcgcattgcaagcgtgcacggaggcgtgagggaacggccc
caagtggcggcgctccgttccggcgtcgacctggtcgtcgcctgtcccggccggctgctc
gacctgctggagcagcagcacggcaaccttgcccggctcgagttcctggtcttcgacgag
gcggaccggatgctcgacatgggctttctgccctcgatccggcagatcatgcggtgggtc
tcccgcaagcggcagaccctgctcttttcggccacctgctcgccggagatcgaaacgctg
gcccgcgacttcctctccgcgccgcagatcgtccggatcggccgccgggccgatcccgcc
caggcggtggtccagtcggtctacgaggtggcgcgggagcagaaggcggagctgctctgc
cgcctcctccaagccgaggagctccggagcgtgctcgtcttttcccggaccaagcacggg
gcggaccggatcgggcgggtcttggagcgggcggggatcccgacggcgaccatgcatgcg
gaccgttcgcagggccagcggacccgcgccttggaggccttcaaggcgggggccgtccgc
gtgcttgtcgcgaccgatatcgccgcccgcggcatcgacgtcgacggcatctcccatgtc
atcaactacgatttcccggcgacgcccgaggattacgtccaccggatcgggcgaacgggc
cgcgctgaggccaccggggatgcgatcagcttcgtcgcccgggaggagctcggagcgctc
cgggcgctggaacggttgctcgggcggaccatcgagcggaagcagatcgccggctttgcg
ccggagggatgctccggggggtcctccgccggggggcagcagagccccgcttctcccgaa
caccgtcccgccggaaggagccgggcctcccgcgccgaccggagaggccgttatcgaagc
ggcggccgcggaagcagccggcacgagccgcgctccttccggccggcatag
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