Methylacidimicrobium sp. AP8: MTHMO_1729
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Entry
MTHMO_1729 CDS
T06915
Name
(GenBank) putative ATP-dependent exoDNAse (Exonuclease V) beta subunit (Contains helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
meap
Methylacidimicrobium sp. AP8
Brite
KEGG Orthology (KO) [BR:
meap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meap03400
]
MTHMO_1729
Enzymes [BR:
meap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTHMO_1729
DNA repair and recombination proteins [BR:
meap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MTHMO_1729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAB4244067
LinkDB
All DBs
Position
I:complement(1659654..1662941)
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AA seq
1095 aa
AA seq
DB search
MRRGLPIARCCLIRASAGTGKTEALAKRIVDLLRSGVDPHRIVAVTFTRKAAAEILDRVL
RKLIEQAEADAERGAADGGGRARSALASLQVFLADLPRLHLRTIDSLFQRIVRVCSMELG
LPEDFEVMDEFEARELRRWLLSRMFAENGSAGERLAEAMRRLRWGDDGKSIRSAADRWIA
RFGDAFADEPERERWGGEALCRSLDPGPPEEDGGELWEEIGRKLRILEPARAEAWEKLRP
LLLAYRGYGPEDRVIRNIVESYDPASGCCGAFYWQRKKIVPDPEAALLFGRLVRFWLRNG
IEAACRRTRGLLSLLADFQARYRHALRRQGRIAFDDAPRLLRQLGARGGGMDRDDWLRVA
YRLDSQWDHWLFDEFQDTSRAQWQALQLLVEEAIQSTEGTKTFFCVGDGKQSIYGWRGGD
RLLLEEIASRYAGGIEVERLAVSYRSRPAVIELVNTVFGDKAALEELYGKAGASWAEGWD
RHSSALEGAGGYSCYLEVGTGLEASAATGTVPEGEAEEGEEASASAVDGVLARLVREVIR
PAERRLSCAVLVQTNSWARRLADRLRREKVGSIFLEGEVFPGADNQLGRLVAAALQSLAH
PADTLAKGWLDASPLGDRFRREWEETGWRLLHEKGFSGVVAEILGRLPGKLDEFGQQRAG
LLREMACRFDRTGSRDVERFLRFWREQPVRLSETTGSVQVMTVHKAKGLGFDVVVVTELE
RSLSVRADLLEVESAGGVAGRLLSPGKAVVAKIPALAAAWAKAREKELFERLCVLYVALT
RARRELYVLAEAPRAGRRRSPEGAEPGAPTLRDLLRRTLRGGEVRPLWGESNVEIRFERG
VRSDPERGERISREEEPGRVGPLLFPPRSVRLTPVAPSRSEEETAAGAWIAARAAAREWG
SRVHERLAGVERGDEPTREALRREARAAPDGPAKQAALAVLSCIESEECRAVFLPPAGTI
VWRERPFEALVSGRWISGIFDRVHLFPGSDGSPAGATLYEFKTDGEGAECGEGRLLARYR
EQIGLYRTALAQMISLPVDRVRAFLVWVVSRRLLEVQPEPARESEGPIPAAQRYQACQTT
RRVPSAGEEAGSPRL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgagggcttccgatcgcgcgctgctgcctgatccgggcctcggccggcaccggc
aagaccgaagccctggcgaagcggattgtcgatctgctccgctccggggtcgatcctcat
cggatcgtcgcggtgacctttacgcggaaggccgcggcggagatcctcgatcgggttctg
cgcaagctcatcgagcaggcggaagccgatgccgagcgcggggccgcggacggcggcggc
cgcgcgcgaagcgcgctcgcctccctccaggtctttctggccgatctgccgcggctccat
ctgcggacgatcgacagcctcttccagcggattgtccgtgtctgctcgatggagctcggg
cttcctgaagatttcgaggtgatggacgagttcgaggcgcgggagctgcgccgctggctc
ctctcccggatgttcgcggagaacggatcggccggagagaggctggcggaggcgatgcga
cggctgcgctggggagacgatgggaaaagcatccggagcgccgccgatcgatggatcgcc
cgtttcggggacgccttcgcggacgagcccgagcgggagcgctgggggggggaggcgctc
tgccggtcgctcgatcccggaccgccggaggaggacggtggggaactttgggaggagatc
ggccgcaagctccggattctggagccggcaagggccgaggcgtgggagaagctccgccct
cttcttttggcgtaccgggggtatggcccggaagatcgggtgatccggaatatcgtggag
agctacgatccggcctccggctgctgcggggcgttttactggcaacgcaagaagatcgtc
ccggacccggaggcagccctgcttttcggccggctggtccggttctggctccggaacggc
atcgaagccgcctgccggcggacgcgcgggctcctctcgctcttggcggactttcaggcc
cgttaccggcatgccctccgccggcaaggacggatcgcgttcgacgatgcgccgaggctc
cttcggcagctcggggcgaggggtggaggcatggatagggacgattggttgcgggtcgcc
tatcggctcgactcccagtgggatcattggctcttcgacgagttccaggatacgagccgc
gcgcagtggcaggccctgcagctcctggtcgaagaagcgattcagtcgacggagggaacg
aagacctttttttgcgtcggagacgggaagcagtcgatctatggatggcggggaggagac
cggttgctcctcgaggaaatcgcttcccggtatgccggcggcatcgaggtcgagcggctg
gccgtttcctatcgttcgcggcccgccgtgatcgagctggtcaatacggttttcggcgac
aaggcggccctcgaggagctctacgggaaggcgggagcttcctgggcggaggggtgggac
cggcactcctcggctttggaaggagccggcggatacagctgctatcttgaggtggggacg
ggcttggaggcatccgcggcgaccggcacggtgccggagggagaggccgaagagggcgaa
gaagcttccgcctcggccgtcgatggggtgctggcccgcctggtccgcgaagtcatccgg
cccgccgagcgacgcctttcctgcgcggttctggtccaaaccaacagctgggcgcgccgc
ttggcggatcgcttacggagggagaaggtgggatcgatcttcctcgaaggcgaggtcttt
cccggcgcggacaaccagctcgggcggctggtggccgccgccctgcagagcctggcgcac
ccggcggacacgctggccaaagggtggttggacgcttctcctcttggggatcggttccgc
cgggaatgggaggaaaccggatggcggctgctccacgaaaaggggttttccggtgtggtc
gcggaaatcttgggacgcctgcccgggaagctcgacgaatttgggcagcagagggcgggc
ctgctgcgggagatggcgtgccggttcgaccggaccggttcccgggacgtggaacggttt
ctgcgtttctggcgggagcagcccgtgcggctttccgagacgacggggtccgttcaagtc
atgacggtccataaggcaaaaggcctcggcttcgatgtcgtggtggtcacagagctcgag
cgttccctctcggtgcgggcagacctgctggaggtagagagcgctggtggggtggccgga
cgacttctctccccgggaaaagccgtggtcgccaagattcccgcgctggcggcggcgtgg
gcgaaggcccgcgaaaaggagctcttcgagcgcctctgcgtgctttacgtcgccttgacc
cgggcccgacgggagctttacgtcctcgcggaggctccgcgggccgggcggcggagatcc
ccggagggcgcggagccgggcgctcccaccctccgcgatctgctgcgccggactctccgg
ggcggagaggtccgcccgctctggggcgagagcaatgtcgaaatccggtttgagcgtggc
gtccggagcgacccggagcggggcgagcgcatctcccgggaagaggaacccggacgtgtc
ggaccgttgctcttcccgccgcgctccgttcgcctaactccggtggcgccgtcgcgatcc
gaggaggagacggcggcgggcgcctggattgctgcccgcgcggcggcccgggagtggggc
agtcgtgtccacgagcggctcgcgggggtggagaggggggatgagccgacgcgcgaagcg
ctccgccgggaggcccgcgccgcacccgacggtccggccaagcaggcggctctggccgtg
ctctcctgcatcgaaagcgaggagtgccgggccgtttttcttccgccggcgggaacgatc
gtctggcgggagaggccgtttgaggccctcgtctccggccgctggatcagcggaatcttc
gaccgggtgcatctcttccctggctccgacggatcgcccgccggcgcgaccctttacgag
ttcaagacggatggggagggggccgaatgcggcgaaggacggctcctagcccgctaccgg
gagcagatcgggctctaccggacggcgctcgcccagatgatctcgcttcccgtcgaccgg
gtgcgcgcgttcttggtctgggtggtatcgcggcgtctccttgaggtccagcccgaaccg
gcgcgcgaaagtgaaggccccattcctgccgctcagcgataccaagcctgccagaccacg
cggagggtgccgagcgcgggcgaggaggccgggtctcccaggttgtga
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