Candidatus Methanoplasma termitum: Mpt1_c03030
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Entry
Mpt1_c03030 CDS
T03540
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
mear
Candidatus Methanoplasma termitum
Pathway
mear03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mear00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpt1_c03030
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_19
AAA_22
AAA_30
Flavi_DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AIZ56201
UniProt:
A0A0A7LFD4
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Position
324684..326177
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AA seq
497 aa
AA seq
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MEKFEDLGINKHVVKAMREIGWIEPTPIQTEAIPAGIEGKDILAQAQTGTGKTGAYASVV
LTRTAAKSRRPSALILAPTRELACQIENEMYKLSKYSGHSSTVVYGGASIEAQIKDIRKG
RDIVVGTPGRLKDLITRDVLDLSQVSVVVIDEADRMLDMGFADELNFIMDEVPKQRQTLL
LSATMAEEVKHLALKYMKDRVDISVSKDEICSDLTEQYYIQMPRDKKEHALKAILRKGCK
AIVFCQTKRMVDVLYNDLSDDFRVGIIHGDIEQNKRERAIKKFRDDQTAILIATDVAARG
IDVNNIDCVINYDIPNDAETYLHRIGRTGRAGNKGIAITFVTKPEKRFIKICEREMGKTI
SPMVPDDLVLSEREETKPIERTVVERAAAAPVAVPQTDAGSQNKMVPLQINLGKEDKFSR
SQLSMFIKKNASLDDDSLGRVGLGQSSSYVEVSHGSVNTVLNAMTGAEWRGKKISMNVAP
KKLRYKDKEAAGLYITG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattcgaagatctgggcataaacaaacacgtcgtaaaggcaatgagggagatc
ggttggatcgagccgaccccgatacagactgaagcaatacccgcaggtatcgaaggaaaa
gatattttagcacaagcgcagaccggtaccggaaagaccggcgcttacgcttcggtggtt
ctgacgcgcacggcggcaaagtcacgcagaccgtcggcactcatactcgcgcccacgagg
gaactggcctgtcagatcgagaatgagatgtacaaactgtcaaaatattccggccacagc
agtacggtcgtgtacggcggagcgagcatcgaagctcagataaaggacatccgcaaagga
agggacatcgttgtcggaactcccggaagacttaaagacctcattaccagagatgttctg
gacctttcacaggtatcagttgtggtgatcgacgaagccgacaggatgcttgatatggga
ttcgccgacgaacttaatttcataatggacgaggttcccaaacagaggcagacgctcctg
ttatccgccacgatggcggaagaagtgaaacaccttgcactcaagtacatgaaagacaga
gtggatatctcagtatccaaggatgagatatgctcggaccttaccgaacaatactacatc
cagatgccgagggacaagaaggagcacgccctgaaggcgatactcaggaaaggatgtaaa
gcgatcgttttttgccagacaaaaaggatggtcgatgttctgtacaatgatctttcagat
gatttcagagtggggattatacacggggacatcgagcagaacaaaagggaacgtgcgata
aagaaattcagagatgatcaaaccgcgatcctcatcgcaaccgatgtcgccgccagagga
atagatgtgaacaacatcgactgcgtgatcaattacgacatccccaacgatgcggaaaca
tatctgcacaggataggcaggacgggaagggcggggaacaaaggcatcgcgataactttt
gtgaccaagccggagaaacgcttcataaaaatatgcgagcgcgagatgggaaaaacaata
tctcccatggtcccggatgatctggtactcagtgaaagagaagaaacaaagcccattgag
aggacagtcgttgaaagggcggcagctgcaccggttgcggtaccccagacagatgccgga
tcccagaataagatggtcccccttcagatcaatctcgggaaagaggataaattcagccgc
tcgcaattatctatgttcatcaaaaagaacgcatccctcgacgacgactctttgggaagg
gtcgggctcgggcagtcttcgtcatatgtggaagtgtcccatggaagcgtcaacaccgtt
ctgaatgcaatgacgggggcggagtggagaggaaaaaagatatccatgaatgttgcgccc
aaaaagctccgatacaaggacaaagaagcagcgggactgtacataacgggataa
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