KEGG   Candidatus Methanoplasma termitum: Mpt1_c03850
Entry
Mpt1_c03850       CDS       T03540                                 
Symbol
fen
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mear  Candidatus Methanoplasma termitum
Pathway
mear03030  DNA replication
mear03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mear00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mpt1_c03850 (fen)
   03410 Base excision repair
    Mpt1_c03850 (fen)
   03450 Non-homologous end-joining
    Mpt1_c03850 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mear03032]
    Mpt1_c03850 (fen)
   03400 DNA repair and recombination proteins [BR:mear03400]
    Mpt1_c03850 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mear04147]
    Mpt1_c03850 (fen)
DNA replication proteins [BR:mear03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mpt1_c03850 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mpt1_c03850 (fen)
DNA repair and recombination proteins [BR:mear03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mpt1_c03850 (fen)
Exosome [BR:mear04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Mpt1_c03850 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AIZ56279
UniProt: A0A0A7LB27
LinkDB
Position
complement(408149..409177)
AA seq 342 aa
MGVNLSSLTEPKTVELSELEGKTVAIDAYNTIYQFLSIIRQPDGQPLCDRTGRVTSHLSG
LLYRTANLITSGIEPCFVFDGKPHPLKMAILAERKERREKAADEWEEAIEEGDIKKAFSK
AQQTSKMTPEIRESSRELISYLGLPMVDAPSDGEGQAAYMCSKGDVWAAASQDFDSLLFG
APTLVRNMTITGRRKVPGKDQYKDVRTEVIDSKEFLESLEITKEQLVDICILMGTDFNPG
IPGIGPKKGLKLIKDHGDLEHVISSKSYDIPLYQDVRDIFLKSKYTDDYSTTSSEIQRDK
IIGMLEGYDFSKERIEGTLDRIDVARKNNRSKKSQRSLDAWF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgggagtgaatctttccagcctgacagagcccaaaaccgtggagttgtccgaacttgaa
ggtaagacggtcgctatcgatgcgtacaacacaatatatcagttcctttctatcataagg
caaccggacggccaaccattatgcgaccgtaccggcagagtgacctctcatttatccggc
cttctctatcgcactgcaaatctcatcaccagcgggatagaaccgtgttttgtgttcgac
ggcaaaccacacccgctgaaaatggcaatactcgccgagaggaaagagagacgcgagaag
gccgcggacgagtgggaagaggcgatcgaagaaggagatatcaaaaaagcattctccaaa
gcacagcaaacgtcgaaaatgacgcctgagataagggaatcatcaagagagctcatatca
tatctgggcttaccgatggtggacgctccttctgacggggaggggcaggcggcgtatatg
tgctcgaaaggcgatgtctgggccgcagcgtcgcaggatttcgattcgctgttattcggt
gcacccacacttgtaaggaacatgaccattaccggcaggaggaaggtccccgggaaggat
cagtataaggatgtaaggacagaggtcattgattcaaaagaattcttggagtcactggaa
ataacgaaggagcagcttgtggatatatgtatcctgatgggtaccgatttcaacccaggc
atcccgggaataggtccgaagaaaggtttgaagctgatcaaggaccatggggatctggaa
catgtgatctcatccaagtcctatgacattcctctgtatcaggatgtgagagatatcttc
ctgaaaagcaaatacaccgacgattattctacaacctcctcggaaattcaaagggataag
atcatcggcatgctggaagggtatgatttctccaaagaaaggatcgaaggaacgttagat
aggatcgatgttgcaagaaaaaacaacagatctaaaaaaagccaacgcagcttagatgct
tggttctga

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