Candidatus Methanoplasma termitum: Mpt1_c04530
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Entry
Mpt1_c04530 CDS
T03540
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mear
Candidatus Methanoplasma termitum
Pathway
mear03022
Basal transcription factors
mear03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mear00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpt1_c04530
09124 Replication and repair
03420 Nucleotide excision repair
Mpt1_c04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mear03021
]
Mpt1_c04530
03036 Chromosome and associated proteins [BR:
mear03036
]
Mpt1_c04530
03400 DNA repair and recombination proteins [BR:
mear03400
]
Mpt1_c04530
Enzymes [BR:
mear01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpt1_c04530
Transcription machinery [BR:
mear03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpt1_c04530
Chromosome and associated proteins [BR:
mear03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpt1_c04530
DNA repair and recombination proteins [BR:
mear03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpt1_c04530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
HBB
DEAD_2
ResIII
DEAD
Helicase_C
IstB_IS21
DZR
zf-MYST
DZR_2
DUF6137
Zn_Ribbon_1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AIZ56346
UniProt:
A0A0A7LFR3
LinkDB
All DBs
Position
486368..488416
Genome browser
AA seq
682 aa
AA seq
DB search
MEQQFCPNCSSIIFPNQKKCGSCGRAVDRSSGIGLDSFLNRSQPEKKMVKEENPEAPYLP
YEPRPMQLEIITDVRRAIDEGRHIVMESGTGTGKTIVSLAAGLEHAMRTGKKIVYLTRTI
SQSDQVMKELRAISTIKQVSGITITGRNKSCPLFAKEGLDDLPPNVLSLMCDDKKKKSMN
DNAGGCRFFDRTKAEINNVMSYCLKEFPTSAELDTYCEKAGVCPYEMKKMLMKEMDVVVA
PYIHILSEDIRTNFIANLGGEDVPLLLIVDEAHNLIDAARDQESFSITMRMIEAAMDECT
VTKTGETLNSIKIEDVIKFLKAAIKQLATQNISLGVKEFRLGKDALESLIMKRFNVTRNE
LNVLIEDMIGVGDKRMDTLSEKGDFSISEIYTLGVALRDWVMSDNDRYVRSVKTSENGEY
LFAACIDPSDIVKFMQEQQGAVHMSGTLQPLEQYYKVMGLPRTAIARTYPSPFPKENRSV
IYVDDVTTKYDKRDPVMMSRIENRIIDLCNAVEKNTLVFFPSYKMMKDMRASLELKIKKP
MFWEESGQQKRTMNALNAFRRGSNGVFFSVMGGSVAEGIDFPGEELCFTIIVGIPYPPPS
LELKAMSDMFDARYGPRMGWRYTSEVPAIRKIRQAIGRMIRTETDYGMAVILDSRVSEYQ
RQLEATLSKHPIKDAVDFFSKR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaattctgtccaaattgcagttcgataatttttccgaaccagaaaaaatgc
ggttcgtgcgggcgtgcagtggacagatcctccggcatcggcttggacagtttccttaac
agatcccagccggagaagaaaatggtgaaggaagagaaccccgaagcgccgtacctcccg
tatgagccgaggccgatgcagcttgagatcatcaccgacgtaaggcgtgcgatcgacgaa
ggaaggcacatcgtgatggaatcgggcacaggcaccggaaagaccatcgtctctctcgcg
gcgggcttggaacacgccatgcgaacgggaaaaaagatagtctacctcacaagaacgata
tctcaatccgaccaggtgatgaaagagctgagagccatctccacaataaaacaggtctca
ggaataacgataaccggaaggaacaaatcctgccctctctttgcaaaagagggtttggac
gatcttcctcccaatgtgctttcgctgatgtgcgacgacaagaaaaaaaagagcatgaac
gacaacgcaggcggctgcaggttcttcgacaggacaaaggcggagatcaacaatgtcatg
agctactgtctcaaagaattccccacctccgccgaactcgatacctactgcgagaaagcg
ggcgtctgcccgtatgagatgaagaagatgctgatgaaggagatggacgtcgtcgttgcg
ccatatatccacatattgtcggaagacatcagaacgaacttcatcgcaaatcttggggga
gaggatgttccgcttttacttattgtggatgaggcgcacaatctgatcgatgcggcgagg
gatcaggagagcttttccatcaccatgaggatgatagaggcggcgatggacgaatgcact
gtaacaaagacgggagaaacgcttaatagcattaagatagaggacgttatcaaattcctg
aaggctgcgataaaacaacttgcgacccaaaacatatctctcggggtaaaagaattcaga
ctcggaaaggatgcccttgagagcctgatcatgaaacgcttcaacgtaacgaggaacgag
ttgaacgttctcatcgaagatatgatcggcgtcggcgacaaacgaatggacactctatct
gaaaaaggggatttctccatctccgagatatacacactcggcgtagctttgagggactgg
gtcatgtcagataacgacagatatgtcaggtcagtgaaaacatccgagaacggggaatac
ctgttcgccgcatgcatagatccgtccgacatagtgaagttcatgcaggagcagcaaggc
gctgtgcacatgtccggaacgttgcaacctctcgaacaatattacaaagtaatgggatta
cccagaacggcgatcgccaggacgtacccttcccccttcccaaaggagaatcgttcggta
atatatgtggacgatgtgaccaccaagtacgacaaaagggatcccgtgatgatgtcacgt
atcgagaacaggataatcgatctgtgcaatgcggtcgagaagaacacactggtcttcttc
ccctcgtataaaatgatgaaggatatgcgcgcaagtcttgaacttaagatcaaaaaacct
atgttctgggaggaatccggacagcagaaaagaacgatgaacgctctgaatgcgttcaga
agaggctcaaacggcgtattcttcagcgtaatggggggttcagtggcggaaggtatcgac
ttcccgggcgaagagttgtgtttcaccatcatcgtgggtattccgtacccgccgccatcg
cttgaattaaaggcaatgtcagatatgttcgacgcaagatatgggccgaggatgggatgg
agatacaccagcgaagttcccgctataagaaagatcagacaggccataggcaggatgatc
aggaccgaaacggactacggcatggctgtgatactcgactcccgggtatcggagtatcaa
agacagctcgaagcaacattgtcaaaacacccgataaaagatgcggtcgacttcttttca
aaaagataa
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