Candidatus Methanoplasma termitum: Mpt1_c12160 Help Entry Mpt1_c12160       CDS       T03540                                  Symbol vat1 Name (GenBank) VCP-like ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism mear  Candidatus Methanoplasma termitum Pathway mear04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:mear00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     Mpt1_c12160 (vat1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mear03019]     Mpt1_c12160 (vat1)    03009 Ribosome biogenesis [BR:mear03009]     Mpt1_c12160 (vat1)    04131 Membrane trafficking [BR:mear04131]     Mpt1_c12160 (vat1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mear04147]     Mpt1_c12160 (vat1) Messenger RNA biogenesis [BR:mear03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      Mpt1_c12160 (vat1) Ribosome biogenesis [BR:mear03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     Mpt1_c12160 (vat1) Membrane trafficking [BR:mear04131]  SNARE   SNARE associated proteins    Others     Mpt1_c12160 (vat1)  Autophagy   Aggrephagy    Other aggrephagy associated proteins     Mpt1_c12160 (vat1) Exosome [BR:mear04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    Mpt1_c12160 (vat1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N CDC48_2 AAA_16 AAA_2 AAA_5 AAA_22 TIP49 AAA_14 AAA_33 Mg_chelatase nSTAND3 NPHP3_N AAA_28 AAA_lid_PRS2_C Sigma54_activat IstB_IS21 AAA_7 Zeta_toxin RNA_helicase ABC_tran NACHT DUF5906 AAA_24 TsaE AAA_18 AAA_25 Parvo_NS1 DUF815 AAA_17 Bac_DnaA NB-ARC ORC-CDC6-like AFG1_ATPase AAA_11 AAA_30 AAA_3 PhoH ATPase_2 TniB SLFN-g3_helicase Motif Other DBs NCBI-ProteinID:  AIZ57078 UniProt:  A0A0A7LDL6 LinkDB All DBs Position 1229358..1231544 Genome browser AA seq 728 aa AA seqDB search MSNDKATKVAELKPGETGKGIARLDPELMDIFGLKIGDIIQIAGTKKTVVKVLRGVPEDA NRGIIRMDGSTRRNAGTSIDERVGIKKIFAKNAEKITFSPTEELRLQGGEEYLAKAMEGR AFAKGDVLTLNVMGNKIDLVVTSLSPPGDAVLMTTSTEVKISDKPAKSADMEVPQVSYDD LGGLGNEVAKIREMIELPLRHPELFKRLGVEAPKGVLLHGPPGTGKTMLAKAVAGETSSN FISLGGPEIMSKFYGESEGKLREIFKEAEENAPSIIFIDEIDSIAPKREEVTGEVERRIV AQLLSLMDGLNSRGKVVVIGATNRPNSIDEALRRPGRFDREIEIGIPDRDGRLEILQIHT RGMPLSDNVDLKALADRTHGYAGADLSALCKEAAMAALRRVLPQMDLETEEIPVNLLEQI SVTKDDFREALKDLQPSTMREVLIEKPNVKWEDIGALESAKQELKEAVEWPLKFGKVFEH MNAKPPKGILLYGPPGTGKTMLAKAVATESEANFIAVKGPEFLSKWVGESEKAVRETFRK ARQASPCVIFMDEIDSIAPERGTGGDNNVTERVISQMLTELDGLESLNDVVVIAATNRPD IMDPALLRPGRFDKSIFIGPPDRESRIMIFGIHTKDKPLADDVDINDLADKTEGCTGADI AAICNEAVMTAVRRIVKPGKVPDDDEIKSCKVEMRDFLSAADKFGPQTSQKLKDYGHKAK DGGTEGYR NT seq 2187 nt NT seq  +upstreamnt  +downstreamnt atgagtaatgacaaagcaacgaaggtcgcggaattgaaacccggagagacaggaaagggc attgcgagacttgatcccgaacttatggacatattcggactgaagataggtgacataata cagatcgcaggtacaaagaagacggtggtaaaggtgttaaggggggtgcccgaggatgcg aaccgcgggataataagaatggacggctccacgagacgcaacgccggcacgtcgatagac gagcgtgtcgggatcaagaagatattcgcaaagaacgccgaaaagataactttctccccg acagaagagctgagacttcagggcggagaggaatacctcgcaaaggcgatggaaggaaga gcgttcgcaaagggcgacgttcttacccttaatgtaatgggcaacaagatcgatctcgtg gtaacatcgctctcgccccccggcgatgcggtgctgatgacaacgtcgactgaagtaaag atatccgacaaacccgcaaaatcggccgacatggaggtcccgcaggtctcgtacgatgac ctcggagggctcgggaacgaagtggcgaagatcagggagatgatagaattacctctgaga cacccggaactgttcaagaggctcggagtagaggctccgaagggtgtgcttctgcacggc cctcccggcacgggcaaaacaatgctcgcaaaggccgtggcgggggagaccagcagtaac ttcatatccctcggcggtcccgagatcatgagcaaattctatggcgaatcggaaggaaag ctcagagagatcttcaaagaggcggaagagaacgcccccagcatcatattcatcgacgag atagactcgatagctccgaaaagggaagaggtcaccggcgaggtcgaaagacgcattgtg gcacagctgctctctttgatggacggcctgaattcgagaggaaaggtagttgtcatagga gcgactaaccggccgaactcgatcgacgaggctctgagaaggcccggaaggttcgacagg gagatcgagataggcattcccgacagggacggaagactggagatcctgcagatccacaca agaggcatgccattgtccgacaatgtcgaccttaaggcactggccgaccgcacccacggt tacgcgggagcagatctctccgctttatgtaaggaggcggcaatggccgccctgaggcgc gtactgccgcagatggaccttgagaccgaagagatacccgtgaacctgttggaacagatc tcggtgacaaaggacgatttcagagaggccctgaaagacctccaaccgtcgacaatgaga gaagtcttgatcgagaagcccaacgtaaaatgggaggatatcggcgcccttgaatcggca aagcaggaactcaaggaagcggtcgaatggccgttgaagttcgggaaggtgttcgaacac atgaacgcgaagcctccaaagggcatactgctttacggccctcccggcacaggtaagacc atgctcgcaaaggccgtggcaacggagtctgaggcgaacttcattgccgtaaaaggtccc gagttcctcagcaagtgggtcggagagtcggagaaggccgtgagagaaacattcaggaaa gcaaggcaggcgtcgccctgcgtgatcttcatggatgagatcgattcgatagcaccggaa agaggcacaggcggagacaataacgtcactgagagagtgatttcccagatgcttactgaa ctcgacggactggagtctctgaacgacgttgtcgttatcgctgcgaccaaccgcccggac ataatggaccctgccttgctgagacccggaaggttcgacaagagcatattcatcggcccg cccgaccgcgagtcgaggatcatgatcttcgggatccacacaaaggacaaaccgttggcg gacgacgtcgacatcaacgaccttgccgacaagacagagggctgcaccggcgcagatatt gccgcgatatgcaatgaggctgtcatgaccgcggtaaggcgcatcgtcaagccgggaaag gtccccgacgacgatgagatcaagagctgcaaggtcgagatgagggatttcctctctgcg gcggacaagttcggcccgcagacatcccagaaactcaaggactacggccataaggcaaaa gatgggggcacagaaggataccgctaa

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