Candidatus Methanoplasma termitum: Mpt1_c12160
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Entry
Mpt1_c12160 CDS
T03540
Symbol
vat1
Name
(GenBank) VCP-like ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mear
Candidatus Methanoplasma termitum
Pathway
mear04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mear00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mpt1_c12160 (vat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mear03019
]
Mpt1_c12160 (vat1)
03009 Ribosome biogenesis [BR:
mear03009
]
Mpt1_c12160 (vat1)
04131 Membrane trafficking [BR:
mear04131
]
Mpt1_c12160 (vat1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mear04147
]
Mpt1_c12160 (vat1)
Messenger RNA biogenesis [BR:
mear03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mpt1_c12160 (vat1)
Ribosome biogenesis [BR:
mear03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mpt1_c12160 (vat1)
Membrane trafficking [BR:
mear04131
]
SNARE
SNARE associated proteins
Others
Mpt1_c12160 (vat1)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mpt1_c12160 (vat1)
Exosome [BR:
mear04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mpt1_c12160 (vat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
Mg_chelatase
nSTAND3
NPHP3_N
AAA_28
AAA_lid_PRS2_C
Sigma54_activat
IstB_IS21
AAA_7
Zeta_toxin
RNA_helicase
ABC_tran
NACHT
DUF5906
AAA_24
TsaE
AAA_18
AAA_25
Parvo_NS1
DUF815
AAA_17
Bac_DnaA
NB-ARC
ORC-CDC6-like
AFG1_ATPase
AAA_11
AAA_30
AAA_3
PhoH
ATPase_2
TniB
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AIZ57078
UniProt:
A0A0A7LDL6
LinkDB
All DBs
Position
1229358..1231544
Genome browser
AA seq
728 aa
AA seq
DB search
MSNDKATKVAELKPGETGKGIARLDPELMDIFGLKIGDIIQIAGTKKTVVKVLRGVPEDA
NRGIIRMDGSTRRNAGTSIDERVGIKKIFAKNAEKITFSPTEELRLQGGEEYLAKAMEGR
AFAKGDVLTLNVMGNKIDLVVTSLSPPGDAVLMTTSTEVKISDKPAKSADMEVPQVSYDD
LGGLGNEVAKIREMIELPLRHPELFKRLGVEAPKGVLLHGPPGTGKTMLAKAVAGETSSN
FISLGGPEIMSKFYGESEGKLREIFKEAEENAPSIIFIDEIDSIAPKREEVTGEVERRIV
AQLLSLMDGLNSRGKVVVIGATNRPNSIDEALRRPGRFDREIEIGIPDRDGRLEILQIHT
RGMPLSDNVDLKALADRTHGYAGADLSALCKEAAMAALRRVLPQMDLETEEIPVNLLEQI
SVTKDDFREALKDLQPSTMREVLIEKPNVKWEDIGALESAKQELKEAVEWPLKFGKVFEH
MNAKPPKGILLYGPPGTGKTMLAKAVATESEANFIAVKGPEFLSKWVGESEKAVRETFRK
ARQASPCVIFMDEIDSIAPERGTGGDNNVTERVISQMLTELDGLESLNDVVVIAATNRPD
IMDPALLRPGRFDKSIFIGPPDRESRIMIFGIHTKDKPLADDVDINDLADKTEGCTGADI
AAICNEAVMTAVRRIVKPGKVPDDDEIKSCKVEMRDFLSAADKFGPQTSQKLKDYGHKAK
DGGTEGYR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgacaaagcaacgaaggtcgcggaattgaaacccggagagacaggaaagggc
attgcgagacttgatcccgaacttatggacatattcggactgaagataggtgacataata
cagatcgcaggtacaaagaagacggtggtaaaggtgttaaggggggtgcccgaggatgcg
aaccgcgggataataagaatggacggctccacgagacgcaacgccggcacgtcgatagac
gagcgtgtcgggatcaagaagatattcgcaaagaacgccgaaaagataactttctccccg
acagaagagctgagacttcagggcggagaggaatacctcgcaaaggcgatggaaggaaga
gcgttcgcaaagggcgacgttcttacccttaatgtaatgggcaacaagatcgatctcgtg
gtaacatcgctctcgccccccggcgatgcggtgctgatgacaacgtcgactgaagtaaag
atatccgacaaacccgcaaaatcggccgacatggaggtcccgcaggtctcgtacgatgac
ctcggagggctcgggaacgaagtggcgaagatcagggagatgatagaattacctctgaga
cacccggaactgttcaagaggctcggagtagaggctccgaagggtgtgcttctgcacggc
cctcccggcacgggcaaaacaatgctcgcaaaggccgtggcgggggagaccagcagtaac
ttcatatccctcggcggtcccgagatcatgagcaaattctatggcgaatcggaaggaaag
ctcagagagatcttcaaagaggcggaagagaacgcccccagcatcatattcatcgacgag
atagactcgatagctccgaaaagggaagaggtcaccggcgaggtcgaaagacgcattgtg
gcacagctgctctctttgatggacggcctgaattcgagaggaaaggtagttgtcatagga
gcgactaaccggccgaactcgatcgacgaggctctgagaaggcccggaaggttcgacagg
gagatcgagataggcattcccgacagggacggaagactggagatcctgcagatccacaca
agaggcatgccattgtccgacaatgtcgaccttaaggcactggccgaccgcacccacggt
tacgcgggagcagatctctccgctttatgtaaggaggcggcaatggccgccctgaggcgc
gtactgccgcagatggaccttgagaccgaagagatacccgtgaacctgttggaacagatc
tcggtgacaaaggacgatttcagagaggccctgaaagacctccaaccgtcgacaatgaga
gaagtcttgatcgagaagcccaacgtaaaatgggaggatatcggcgcccttgaatcggca
aagcaggaactcaaggaagcggtcgaatggccgttgaagttcgggaaggtgttcgaacac
atgaacgcgaagcctccaaagggcatactgctttacggccctcccggcacaggtaagacc
atgctcgcaaaggccgtggcaacggagtctgaggcgaacttcattgccgtaaaaggtccc
gagttcctcagcaagtgggtcggagagtcggagaaggccgtgagagaaacattcaggaaa
gcaaggcaggcgtcgccctgcgtgatcttcatggatgagatcgattcgatagcaccggaa
agaggcacaggcggagacaataacgtcactgagagagtgatttcccagatgcttactgaa
ctcgacggactggagtctctgaacgacgttgtcgttatcgctgcgaccaaccgcccggac
ataatggaccctgccttgctgagacccggaaggttcgacaagagcatattcatcggcccg
cccgaccgcgagtcgaggatcatgatcttcgggatccacacaaaggacaaaccgttggcg
gacgacgtcgacatcaacgaccttgccgacaagacagagggctgcaccggcgcagatatt
gccgcgatatgcaatgaggctgtcatgaccgcggtaaggcgcatcgtcaagccgggaaag
gtccccgacgacgatgagatcaagagctgcaaggtcgagatgagggatttcctctctgcg
gcggacaagttcggcccgcagacatcccagaaactcaaggactacggccataaggcaaaa
gatgggggcacagaaggataccgctaa
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