Candidatus Methanoplasma termitum: Mpt1_c13060
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Entry
Mpt1_c13060 CDS
T03540
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mear
Candidatus Methanoplasma termitum
Pathway
mear03022
Basal transcription factors
mear03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mear00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpt1_c13060
09124 Replication and repair
03420 Nucleotide excision repair
Mpt1_c13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mear03021
]
Mpt1_c13060
03036 Chromosome and associated proteins [BR:
mear03036
]
Mpt1_c13060
03400 DNA repair and recombination proteins [BR:
mear03400
]
Mpt1_c13060
Enzymes [BR:
mear01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpt1_c13060
Transcription machinery [BR:
mear03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpt1_c13060
Chromosome and associated proteins [BR:
mear03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpt1_c13060
DNA repair and recombination proteins [BR:
mear03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpt1_c13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Asparaginase_C
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AIZ57168
UniProt:
A0A0A7LDX0
LinkDB
All DBs
Position
complement(1328061..1329968)
Genome browser
AA seq
635 aa
AA seq
DB search
MTGSPDVRDIFPYDFRGYQEEIAELIANTTNNGVAAVIESGTGTGKTVVSLTGALKTIIG
TDSKIIYLTRTKSQQKQIVYEAGAISQKKQIICIGVQGRGVSTCPMMSKDPENASGTSEE
LSKLCSEYKKDDGTGRPCKYYENIGRTDLQEILDHVRNVHPEPEKLSEYCLKKELCPYET
VKHLIKHADVVAAPYSFIFMPHIRERFLEWAGTPLSKMVMIVDEAHNLPDYLREVMTLEY
SMKAMDLAEKEAMEWNDPEVYSGLSVSDIIAVLRECLNEALSEYLTGDDGMIPYTFLQDE
LMYRLGVSSHALDMIYKGLIDHGEMIANIKKAKKKLPRSFIRSMGAFLTLWNTADEEMNI
FLVLGGENPKFQAYCLDPRVAAEPLRSCKASVHMSGTLAPLSDYTEEIGLEEVAERTFPS
PFPPENLKIVYVNDVSTKFDEFNNIPEIYSRMKEHIISLARVVNKNTAVFFPSYSLMERF
LRDGIEKDIGKPLFIERRGMTQPELMEEVSQFKLSEGSILFAITGGRISEGLDFPDKDME
MAILVGIPYPKPTAKQEALRRYYDMRFGNGWEHSSKIPAMRKMRQAIGRLIRSGTDRGMA
VILDRRVFNLEDIKAEPTDDPCGDVMEFFGKGSKS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatctccagacgtcagggacattttcccatatgatttcagaggatatcaggaa
gagatagccgagctcatagcgaataccacgaacaacggtgttgccgcggtcatagagtcc
ggcaccggcaccggcaagaccgttgtctcgctgacgggcgccctcaagacgatcatcggt
acggacagtaagataatctatcttacaaggaccaagtcccagcagaagcagatcgtatac
gaagcaggcgcaatatctcagaaaaaacagataatctgcataggcgtgcagggcaggggc
gtaagtacatgccccatgatgtcaaaggatccggagaacgcatcgggcacatccgaagaa
ctgtctaagctatgttcggagtacaagaaggatgacggcacgggaaggccctgcaaatat
tatgagaacatcggaagaacagatcttcaggagatcttggaccacgtaaggaatgttcat
ccggaaccggagaaactttcggaatactgtctgaaaaaggagttatgtccgtacgagacg
gtcaaacatctgatcaaacatgcggatgtggtcgccgctccgtattcgttcatcttcatg
ccgcacatccgcgaaaggttcctcgaatgggccggaactcccctgtcaaagatggtcatg
atcgtcgatgaggctcacaaccttccggactatttgcgggaagtgatgacgctggaatac
agtatgaaggccatggaccttgcggagaaggaagcaatggaatggaacgacccggaggtg
tattccggactttcggtgtctgacatcatcgcggtattgagagaatgtttgaatgaagcg
ttatcggaatatctcacaggcgacgacggaatgataccgtatactttccttcaggatgag
ctcatgtacagattgggagtatcgtcgcatgccctcgatatgatatacaaggggcttata
gaccacggagagatgatagccaacataaagaaggcgaaaaagaaactcccacgatcgttc
atccgatcgatgggagcgttcctcacgctgtggaacaccgcggatgaagaaatgaatata
ttcttggttctgggaggagagaatccgaagttccaggcatactgtctcgatccgagggtc
gccgccgagccgctgagatcgtgcaaggcatccgtccacatgtcggggacgctggcacct
ctttccgattatacggaagagataggtctggaggaggtcgcggaacgcactttcccgtcc
ccattcccgcccgagaatctgaagatcgtttatgtcaacgacgtttccacgaagttcgac
gaattcaacaatattccagaaatatattcgaggatgaaggaacacataatatctctggca
agagttgtgaataagaacaccgcggtgttcttcccctcgtactctttgatggaaaggttc
cttagggatgggatagaaaaagatatcgggaaaccccttttcattgaaagaagaggaatg
acccagcccgaacttatggaagaggtctctcaattcaagctctccgaaggaagcatactt
tttgcgataaccgggggaaggataagcgaaggtcttgacttccccgacaaggacatggag
atggcgatactcgtaggaataccatatcctaaaccgaccgctaagcaggaagcactacgc
agatactacgatatgaggttcggcaacggatgggagcactcgtcgaagatccccgcgatg
aggaagatgagacaggccatcggcagactgatcaggtccgggacggacaggggcatggcg
gtgatcctggaccgcagggtgttcaacctcgaggacataaaagccgagcccacggacgat
ccgtgcggagatgtcatggaattcttcggaaaaggctctaaatcatga
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