Methanobrevibacter sp. AbM4: Abm4_0126
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Entry
Abm4_0126 CDS
T02687
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
meb
Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meb03016
]
Abm4_0126 (truD)
Enzymes [BR:
meb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Abm4_0126 (truD)
Transfer RNA biogenesis [BR:
meb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Abm4_0126 (truD)
Prokaryotic type
Abm4_0126 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
15797621
NCBI-ProteinID:
AGN16046
UniProt:
R9SIW2
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Position
169727..171010
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AA seq
427 aa
AA seq
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MLNANTYVTDDPGIGGTIRNSYEDFYVEEIPEIEPTGEGPNIWIWIEKVGRTTLDVLLDI
ARDLHISRKRMGFAGMKDKKALTRQWICISNMESDEKLNEVLALRDTIHNTKFLKVVRGR
KKLRMGQLKGNKFRIKIKDIPFNDDITSFEDASNRAKEILGQLEITGVPNYFGWQRFGKP
RTSTHLVGEALIQNDLKKAVDLYIGHPCMEESPDSIKARQAYDDGNMEESLELMHGGMRY
EKMMLRQLIHDYNKFAHLDDKSYKSALLALPKPLQRMFVHAYQSYLFNDVVSRRVEMGIN
SYVEGDIIIDDDEAIIRDKSPEEYDRLIKEFKANPTCPLYGTKVPFAGAKVGEMEREVLD
KYGLKKEDFECPKMPKLGSHGLRRSMRFRVWDTHAEACDDGIIVEFSINKGSYATAVLRE
IMKVDVV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatgcaaatacatatgttacagatgatccaggtattggcggaactattagaaat
tcctatgaggacttctatgttgaggagatacctgagatagagcctactggtgagggaccc
aatatttggatatggattgagaaggtcggaagaacaacattggatgttttgttggatatt
gcaagagatttacatataagccgtaaacgtatgggttttgcaggaatgaaggataaaaag
gctttaacccgtcagtggatatgtatatccaatatggaatccgatgagaaactcaatgag
gtcttggctttaagggataccatccataacaccaaatttttaaaggttgtaaggggacgt
aaaaagcttagaatgggacagttgaagggcaataagttcagaatcaagatcaaggatatt
ccattcaatgatgacatcacatctttcgaggatgcctcaaacagggccaaggaaatttta
ggtcaattggagatcacaggagttccaaactatttcggatggcagaggttcggaaaacct
agaacatcaacacatcttgtaggtgaggcacttatccagaatgatcttaaaaaggctgtg
gatctatatataggccatccatgtatggaggaatcaccggacagcattaaggcaagacag
gcatacgacgatggcaatatggaggaatcactggaattgatgcatggtggaatgcgctat
gagaagatgatgctaaggcagcttatccatgactataataagttcgcccaccttgatgat
aaatcatataaaagcgcattgcttgcccttccaaagcctcttcagagaatgtttgtacat
gcataccaatcatatctctttaatgatgtcgtatccagaagggttgagatgggtattaat
tcatatgttgaaggggacatcataatagatgatgatgaggccatcataagggataaaagt
cctgaggaatatgataggttaattaaggagttcaaggcaaatccgacctgtccactatat
ggtaccaaggttccctttgcaggtgctaaggtaggtgaaatggaaagggaagttttagat
aaatatggccttaaaaaggaagacttcgaatgtccgaagatgcctaaattgggaagtcat
ggtttgagacgttccatgaggtttagggtatgggacactcatgcggaagcctgtgatgat
ggaattattgtggagttttcaattaataaaggctcatatgcaactgcagttttacgtgag
attatgaaggttgacgttgtctag
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