Methanobrevibacter sp. AbM4: Abm4_0251
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Entry
Abm4_0251 CDS
T02687
Symbol
tfe
Name
(GenBank) transcription initiation factor TFIIE alpha subunit Tfe
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Abm4_0251 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meb03021
]
Abm4_0251 (tfe)
Transcription machinery [BR:
meb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Abm4_0251 (tfe)
Prokaryotic type
Archaeal type
TFE
Abm4_0251 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Sulfolobus_pRN
HVO_2753_ZBP
wHTH-PRTase_assc
TrmB
HTH_9
RepL
DNA_ligase_ZBD
Rrf2
HTH_Cmi2_C
DUF7560
Zn_ribbon_4
Zn_ribbon_FGT1_2
Fib_alpha
HypA
Motif
Other DBs
NCBI-GeneID:
15797745
NCBI-ProteinID:
AGN16165
UniProt:
R9SI77
LinkDB
All DBs
Position
complement(308983..309438)
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AA seq
151 aa
AA seq
DB search
MLIVQCLNKGVKTDEEIAEKTGIRLNIVRKILYRLYDAGLASYKRHKDPETQWYSYDWKF
EPEEVNKTIKKQINDEIEFLKNILDNEKDNMFFSCPEGHTRFDFEDASNVGFTCPECGEE
VVFEDNADIIKELEKDIKKYQKIYDSIEVSE
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcttattgttcaatgccttaataagggagtaaaaactgacgaagagattgcagaaaaa
actggaatcagattaaatattgttagaaaaatactctacagactttatgatgctggactt
gcaagctataaaagacataaagatcctgaaacacaatggtatagctacgattggaaattt
gaacctgaagaggttaataaaaccattaaaaaacaaatcaatgacgagattgaattcctt
aaaaacattttagacaatgaaaaagacaatatgtttttctcatgccctgaaggacacacc
agatttgattttgaagacgcaagtaatgtaggttttacttgtccagaatgtggtgaagaa
gtcgtatttgaagataatgctgacatcattaaagaactagaaaaggatattaaaaaatat
caaaaaatctatgattcaatagaagtcagtgaataa
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