Methanobrevibacter sp. AbM4: Abm4_0349
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Entry
Abm4_0349 CDS
T02687
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A'' RpoA2
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Abm4_0349 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meb03021
]
Abm4_0349 (rpoA2)
Enzymes [BR:
meb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Abm4_0349 (rpoA2)
Transcription machinery [BR:
meb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Abm4_0349 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
POTRA_2
DUF4369
Motif
Other DBs
NCBI-GeneID:
15797842
NCBI-ProteinID:
AGN16257
UniProt:
R9SHL4
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All DBs
Position
419807..421078
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AA seq
423 aa
AA seq
DB search
MASELTKDEVLEKVNEVVDSKNYNFPPKYREDITDAYIRRDLTDKELDTLVDKVEEAYER
SFIQAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPT
MDIYLSSEENPENGLALNQDEEFVRKLANYIGKSTINDVLEDFNVNYAEMKVDAILNKDK
IADKRLDYDDVISTIEKSFKKVKVDDNKFTFEPSKTSIRELRLLADKVRDTQISGLKGIG
KVIIRKEDEWIIHTEGSNLKDILKIDGIDNVRTTTNDIHEIYVVLGIEAARNAIIHEAYR
TLSEQGLSVDIRHIMLVADMMTSEGVVKSIGRHGIGGEKSSVLARAAFEETGKHLLRASI
HGETDKLTGVIENIIVGQPIPLGTGSVDVIMDKDQTEETTKSNRAKAKKTLKAIKKERAK
SMY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaattaactaaagatgaagttttagaaaaggtaaatgaagtagttgatagt
aaaaattataatttcccacctaaatatagggaagatataactgatgcatacattagaagg
gatcttaccgataaggagttagatactttagttgataaagtagaagaggcttatgaaaga
tcctttattcaggcaggtgaggctgtaggtactgtagctgctcaatctgtaggtgaaccg
ggtactcagatgactatgcgtactttccactatgcgggggtagcagaattaaacgtaacc
ttaggtttacctaggcttattgaaattgtagatgctcgtaaaaagatttcaacacctaca
atggatatttatttgtcctctgaagaaaatcctgaaaatggtttagcacttaatcaagat
gaggaatttgtacgtaaacttgcaaactacattggtaaaagtaccataaatgatgtactt
gaggatttcaatgtaaactatgctgaaatgaaagtggatgctattttaaacaaggacaaa
attgcagataaaagacttgattatgatgatgtaatttcaaccattgaaaaatcatttaaa
aaggttaaagttgatgataataaatttacttttgaaccatctaagacttccattagggaa
ttacgtcttttagcagataaggttagagatactcaaatcagtggtttaaaaggtattgga
aaagttattatcagaaaagaagatgaatggattatacatactgaaggttcaaatcttaaa
gatattcttaaaatcgatggaattgacaatgttagaacaactacaaacgatatccatgag
atttatgttgttttaggtattgaagctgcacgtaatgctattattcatgaagcttataga
accttatctgaacaaggtctttctgttgatattagacatattatgcttgtagctgatatg
atgacctctgaaggtgttgtaaaatctattggtcgtcatggtattggtggagaaaaatct
tctgtccttgctcgtgcggcatttgaggaaactggtaaacacttacttagggcaagtatt
catggggaaaccgataaacttactggtgttattgaaaacattattgtcggtcaacctata
ccattaggtaccggatctgtagatgtcataatggataaggatcaaacagaagaaactact
aaatccaatagggctaaagctaaaaaaacccttaaggctatcaaaaaagaaagagctaaa
agtatgtattaa
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