Methanobrevibacter sp. AbM4: Abm4_0704
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Entry
Abm4_0704 CDS
T02687
Symbol
endA
Name
(GenBank) tRNA intron endonuclease EndA
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
meb
Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meb03016
]
Abm4_0704 (endA)
Enzymes [BR:
meb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Abm4_0704 (endA)
Transfer RNA biogenesis [BR:
meb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Abm4_0704 (endA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
15798198
NCBI-ProteinID:
AGN16597
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All DBs
Position
885134..885649
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AA seq
171 aa
AA seq
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MRGDLYDEIVTVPITETSRRPIALNEKSHFGKLTDKALELSLIEAAYLMKNNRLDIYKDD
VKCEPSYIINLIKERDIYGKFLVYSDLKNRGYVIKTGFKYGSEFRLYERGLAPGKGHSNY
LVKVVYEKYEINALDFASYVRVAHGVNKNLLLAVVDDDLDITYYNIEWTRP
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggagatttatatgatgagatagtgactgttccaataactgagacttcaagaaga
cctatagcattaaatgaaaaaagtcactttggaaaattaacagataaggctttagagtta
tctttaattgaggcagcatatttgatgaagaacaatcgtttagatatttataaagatgat
gttaaatgtgaaccttcctatattattaacttaataaaagaaagagatatttatgggaaa
ttccttgtttattcagatttaaagaataggggatatgttataaaaacaggatttaaatat
ggttctgaatttagattatatgaacggggtttggctcctggtaaaggtcattccaactat
cttgtaaaagtggtatatgaaaagtatgagataaatgctcttgattttgcaagctatgtt
agagtggcacatggtgtaaataagaatcttctacttgctgttgtagatgatgatctggat
ataacatattataacatagaatggacaagaccataa
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