Methanobrevibacter sp. AbM4: Abm4_0881
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Entry
Abm4_0881 CDS
T02687
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
meb
Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meb03400
]
Abm4_0881
DNA repair and recombination proteins [BR:
meb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Abm4_0881
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
FtsK_SpoIIIE
TrwB_AAD_bind
LXG
DUF5344
Motif
Other DBs
NCBI-GeneID:
15798373
NCBI-ProteinID:
AGN16768
UniProt:
R9SLS2
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All DBs
Position
complement(1106502..1108022)
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AA seq
506 aa
AA seq
DB search
MEDNVIGRCVGETSLTNVSFISKKMPKMGEYVTLEYDNKIILGMIESLVRGSVSLNVDIY
DPDTIERIRNIEGDDYYIKGSVRILGDVDHLKIPRTPAQPGTEIKLASDEVLDKVFRDSN
GLKLGHLISNENVEVNVDINKMVSRHLAILAMTGAGKSNTVSVLIDGLLQKNGCPLIFDM
HSEYVGAEFTNGDVNVIQPILNPLYMEFSELLDLANIKSSSAFIQERYLRKAFKQAKSEI
REGIHASNDFLENIRAILERWSLDEDNYDSKDRNRMTDVLNKIDDMISRYGNLFNSNASD
ILSNIKLGQANIIDLGQVDERVAEVLVQHVLRTALKSRKDYVHGDKTKLGFPLFCVLEEA
HILAPNNRNTKCKYWIQRIAREGRKFGLGLCLVSQSPKTVDQDALSQANNMIILRLVEPK
DQKHVQAASESLSDDLVGQLPSLNIGEALVLGLMTKVPTLVKIDEFKGRSVGGDIDIVGA
WSQSIKDKEEDLERQRYESEQLDGFY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaatgttataggaagatgtgtaggtgaaacctcacttacaaatgtaagtttt
atatctaagaaaatgcctaaaatgggtgaatatgttacattggagtatgataataagatc
atattgggtatgattgaatccttggtacgtggaagcgtatctttaaatgtggacatatat
gatccggatacgattgagagaattaggaatattgaaggtgatgactattacattaagggt
tctgtaagaatacttggagatgtggaccatttaaagatacctagaacacctgcacagcca
ggaaccgagattaaacttgcaagtgatgaagtccttgataaggtattcagggattcgaat
ggtcttaaattgggacatcttatctctaatgaaaatgttgaggtgaatgttgatattaat
aagatggtttcaagacatcttgcaatacttgctatgacaggtgcaggtaaatctaatacc
gtaagtgtgcttattgacggattacttcagaagaatggctgtcccttgatatttgatatg
cactcagagtatgtgggtgcggaatttacaaatggtgatgtgaatgttatacagcctata
ttaaatccgctttatatggaattttcagaattattggaccttgcaaacattaaaagtagc
agtgcattcatacaggaaagatatttgagaaaggcatttaaacaagcaaaaagcgagata
agggaaggaatacacgcgtcaaatgattttttagaaaatatacgtgcgatacttgaaaga
tggtccttggatgaggataattatgattcaaaggatagaaatagaatgaccgatgtttta
aacaaaatcgatgatatgatttcaagatatggcaatctatttaattccaatgcctccgat
attttatccaatatcaaattagggcaggccaatatcattgatttaggtcaggtggatgag
agggttgcagaggttttagttcaacatgtattaagaacagccttaaaaagtagaaaagat
tatgttcatggagataagaccaaactgggatttcctttattctgtgtcttagaggaggct
catattttagctcctaataataggaatactaagtgtaaatattggattcaaagaattgcc
cgtgaaggccgtaagtttggtttgggcctatgtcttgtaagccaatcacctaaaacagta
gaccaggacgcattgtcccaggcaaacaatatgatcatcttaaggcttgtggaacctaaa
gaccagaaacatgttcaggctgcaagcgaatctttatcagatgatttggtaggtcagtta
ccttctttaaatattggtgaggctttagttttaggactgatgaccaaggttccaacactt
gtaaagattgatgaatttaaaggccgctccgttggtggagatatcgatattgttggagct
tggagtcaaagcattaaggataaagaggaggatctagaaagacaaagatatgaatccgag
caattggatggtttctactag
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