Methanobrevibacter sp. AbM4: Abm4_1479
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Entry
Abm4_1479 CDS
T02687
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Abm4_1479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meb03400
]
Abm4_1479
Enzymes [BR:
meb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Abm4_1479
DNA repair and recombination proteins [BR:
meb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Abm4_1479
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
15798969
NCBI-ProteinID:
AGN17348
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All DBs
Position
1724039..1724872
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AA seq
277 aa
AA seq
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MDKVIFGPAGKPKGYKGKAYEPCGYLNERRLYAYEYQSGRGLRIGEESSKKLKADSKRNK
VKISMHCPYYINMCAKEDEKIQKSIESLFKCGQVGEWMGAYRLVFHPGYYTKQSPSLALE
KAENGYKRLLKKCEEEGLEDYTFAPETTGKKSQLGNVDEIIHMCENLEHFEPTIDFAHIH
ARGEGILNKKEDYNSIFSKLEDHLNIERLHCHFTTIEYTNKGEKRHHTLEENDKYGPNIE
DLLQNLIDYGWKATIICETPKLDEDAIKMREIYESLL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtaatatttggacctgcaggaaaacctaaaggatataaaggcaaggcatat
gagccatgcggatatcttaatgagcgaagactatatgcatatgaatatcaatcaggccgt
ggacttagaattggcgaggagagttctaaaaaacttaaagcagactctaaaagaaataaa
gtaaaaatctcaatgcattgtccttattacataaacatgtgtgctaaagaggatgagaaa
atccaaaaatccattgaaagtctatttaaatgcggacaagttggggaatggatgggagca
tatagattagtttttcatccaggatactatacaaaacaaagtcctagtttagctcttgaa
aaggcagaaaatgggtataaaagattacttaaaaaatgcgaagaggaaggacttgaagat
tacacatttgctccagaaacaactggaaagaaatcacagcttggaaatgttgatgagata
atccacatgtgtgaaaatctcgagcatttcgaaccaactatagactttgcacatattcat
gcaagaggtgaaggaatattaaacaaaaaagaggattataattcaatcttctcaaaacta
gaggaccacctcaatattgaaagattacattgtcattttacaacaattgaatatactaat
aagggagaaaaaagacaccacactctagaggagaatgacaaatatggtcctaatattgag
gatttacttcaaaacctaattgactatggatggaaagctacaataatatgtgaaacacca
aaattagatgaagatgcaattaaaatgagagaaatctatgaaagtttactataa
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