Methanobrevibacter sp. AbM4: Abm4_1647
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Entry
Abm4_1647 CDS
T02687
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp subunit PCNA family Pcn
KO
K04802
proliferating cell nuclear antigen
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb03030
DNA replication
meb03410
Base excision repair
meb03420
Nucleotide excision repair
meb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Abm4_1647 (pcn)
03410 Base excision repair
Abm4_1647 (pcn)
03420 Nucleotide excision repair
Abm4_1647 (pcn)
03430 Mismatch repair
Abm4_1647 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meb03032
]
Abm4_1647 (pcn)
03400 DNA repair and recombination proteins [BR:
meb03400
]
Abm4_1647 (pcn)
DNA replication proteins [BR:
meb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Abm4_1647 (pcn)
DNA repair and recombination proteins [BR:
meb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Abm4_1647 (pcn)
MMR (mismatch excision repair)
Other MMR factors
Abm4_1647 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
Abm4_1647 (pcn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad9
Hus1
Phage_Gene47
VanA_C
Motif
Other DBs
NCBI-GeneID:
15799135
NCBI-ProteinID:
AGN17505
LinkDB
All DBs
Position
complement(1886517..1887251)
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AA seq
244 aa
AA seq
DB search
MFKAELSDPNILKTSFDAISSIVDEVQLQTDSEGVRLNALDRSHITFVHLELKASLFDEF
ICDEPEKINVDTEELMKVLKRSKSNDRVILSLDEGNLIITFEGEAKRTFKIRLIDMEYDA
PSAPPLEYPTKFDIPFALLKDSINDIDIFSDKIILMVNEEVFKAAAEGEFGDANIEYIHG
EKIDNEAKSIFSLEKIREMLKADKFSDVATIKLGNDMPLSLSLKMVSEEGELSFLLAPRI
ESDE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagcagagttaagtgacccaaatattttaaaaacaagtttcgatgctatttca
tcaattgttgatgaagtacaattacaaactgatagtgaaggtgtcagattaaatgctctt
gatagaagtcatataacttttgttcatttagagcttaaagcaagtttgtttgatgaattt
atttgcgatgaacctgaaaaaataaatgttgacactgaagaattgatgaaagttttaaaa
cgttccaaatctaacgatagggtaattttatcattggatgaaggtaatcttattattacc
tttgaaggtgaagctaaaagaacatttaaaatacgccttatagatatggaatatgatgct
ccatcagcaccaccattagaatatccaactaaatttgatattccttttgcacttttaaaa
gattctattaatgatattgatattttctctgataaaatcatattaatggttaatgaagag
gtatttaaagcagcagctgaaggagaattcggtgatgctaatattgaatatatacatggt
gaaaaaatagataatgaagctaaatccatattctctttggaaaaaattagggaaatgctt
aaagcagataaattctcagatgttgctactattaaactaggtaatgatatgcctttaagt
ctttcacttaaaatggtttctgaggaaggggaacttagtttcttacttgctccacgtatt
gaatccgatgagtaa
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