Methanobrevibacter sp. AbM4: Abm4_1667
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Entry
Abm4_1667 CDS
T02687
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb00300
Lysine biosynthesis
meb00470
D-Amino acid metabolism
meb01100
Metabolic pathways
meb01110
Biosynthesis of secondary metabolites
meb01120
Microbial metabolism in diverse environments
meb01230
Biosynthesis of amino acids
Module
meb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Abm4_1667 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Abm4_1667 (lysA)
Enzymes [BR:
meb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Abm4_1667 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
PG_1098_N
Motif
Other DBs
NCBI-GeneID:
15799154
NCBI-ProteinID:
AGN17524
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Position
complement(1904489..1905772)
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AA seq
427 aa
AA seq
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MDLNIKVNDKDHLDIGGADAVDIANEFGTPVYAIDENRIRDNYNRFYNAFSKYYPDFKVF
YACKANTNLAVMKILESEGCCVDTVSPGEVYISEKLGFSPDRILFTGNNITNEELKMVHD
MGVILNVDSRSALKRLAEVVDPKGLKVSIRVNPMVGAGHHEHTITGGVMSKFGIMDNEAT
EVYKLAQDLGFDPIGIHSHIGSGILDPEPFKLAIGSTMDIAGKVHEDLGIDFEFVDFGGG
IGVPYTPDEKALDIDHFAHENVEFFKGKLKEYNMKNPTMFLEPGRYIVADAVTLLVQVNS
VKQSYRKYIGVDAGFNTLLRPCMYGSYHHIVDASKMSAPITQEVDVAGDVCESGDLFARD
RPLPDIEEGDILGILNSGAYGFTMASNYNSRPLPAEVLIKDGNPTLVRKAQTFDDLFRNQ
IIPDYLQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggacttaaatattaaagtaaatgataaagaccatttggatattggtggtgctgatgca
gtggatattgcaaatgaatttggtactccagtatatgcaatagatgaaaaccgtattagg
gataattataatagattttacaatgctttttcaaaatattatcctgactttaaagtgttc
tatgcttgtaaagcaaatacaaaccttgctgttatgaaaatattagagagtgaaggttgt
tgcgttgatacagtatcacctggtgaagtttatatctctgaaaaattaggattctctcca
gatagaatattatttacaggaaataacattacaaatgaagagcttaaaatggttcatgac
atgggtgttattttaaatgttgattctagatctgctttaaaaagacttgcagaagttgtt
gatcctaagggtttaaaagtgtccataagggtaaatccgatggttggtgcaggtcaccat
gagcatactattaccggtggagtaatgagtaaattcggtattatggataatgaggctaca
gaagtttataaattggcccaggatttaggatttgatcctatcggtatccattcacatata
ggttcaggtatattagatcccgaaccatttaaattagctattggttccactatggatata
gcaggtaaagtacatgaggatttaggtattgactttgagtttgttgacttcggtggaggt
ataggagtaccctatacacctgatgagaaggcattggacattgaccattttgcccatgaa
aatgtagagttctttaaaggaaaattaaaagaatataacatgaaaaatccaaccatgttc
ttagaacctggaagatatatagttgcagatgctgtaaccttacttgtacaagtaaacagt
gtaaaacaaagttatagaaaatatattggtgtggacgcaggatttaacaccttacttagg
ccatgtatgtatggttcctaccatcatattgtagatgcaagtaaaatgagcgcaccaata
acacaagaggtagatgttgcaggagatgtatgtgaatccggagacttatttgcaagggac
aggcctcttccagatattgaggaaggggatattttaggtatcttaaacagcggagcatat
ggatttaccatggcttcaaactataattcaagaccacttcctgctgaagttttaattaag
gacggtaatccaactttggttcgtaaagctcaaacatttgacgatctatttagaaatcag
attatcccagattatttacaataa
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