Methanobrevibacter sp. AbM4: Abm4_1702
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Entry
Abm4_1702 CDS
T02687
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb00521
Streptomycin biosynthesis
meb00523
Polyketide sugar unit biosynthesis
meb00525
Acarbose and validamycin biosynthesis
meb00541
Biosynthesis of various nucleotide sugars
meb01100
Metabolic pathways
meb01110
Biosynthesis of secondary metabolites
meb01250
Biosynthesis of nucleotide sugars
Module
meb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Abm4_1702 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Abm4_1702 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Abm4_1702 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Abm4_1702 (rfbB)
00525 Acarbose and validamycin biosynthesis
Abm4_1702 (rfbB)
Enzymes [BR:
meb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Abm4_1702 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
NifZ
Motif
Other DBs
NCBI-GeneID:
15799190
NCBI-ProteinID:
AGN17558
UniProt:
R9SPK5
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All DBs
Position
complement(1952438..1953445)
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AA seq
335 aa
AA seq
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MTTVLVTGGAGFIGSNFLRYMVNKYPNYDFINLDALTYCGNLENLKDIEDKDNYSFVKGN
ICDTELVNGIVENVDYIVHFAAESHVDRSIEDPGIFIKSNILGTQTLLDASKRNDIKKFL
QVSTDEVYGSLGPKGYFTEQTPLQANSPYSASKAGADLMVRAYHNTFDLPVNITRCSNNY
GPYQFPEKLIPLMISNAIEDKELPVYGDGKNIRDWLHVYDHCTGIDLVLHKGKSGEVYNI
GGHNERANIDIVKLILKELDKPESLIKFVSDRLGHDRRYAIDSSKIRRDLGWRPKYTFED
GIIETIHWYLDNQDWISKVKSGQYQEYYNKIYKDR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgttttagttaccggtggagcaggatttataggaagcaactttttaagatat
atggttaataaatatccaaactatgattttattaatcttgatgctttaacctactgtgga
aatcttgaaaacttaaaagacattgaggataaagacaattattcctttgttaaagggaat
atctgcgatactgaattagtcaacggtattgtggaaaatgtggattatattgtccatttt
gcagcggaaagccatgtggatagaagtattgaagatcccggaatctttattaagtcaaat
atcttaggtactcaaacacttttagatgcttcaaagaggaatgatattaagaagttttta
caggtttcaactgatgaggtttatggtagcttaggtcctaaaggttattttacagaacaa
accccacttcaagcaaatagtccctattctgcatccaaagcaggagcagatttaatggtt
agagcatatcataatacatttgatttgccggtaaatataactcgttgttcaaacaactat
ggtccttatcaatttccagagaaattaattccattaatgattagtaatgctattgaggat
aaagagcttccagtgtatggtgacggtaaaaacattagggattggctacatgtatatgat
cattgtactggaatagatttagttttacataaaggtaaatctggtgaggtttataatatc
ggtggtcataatgaaagggcaaacattgatattgtaaagcttattttaaaggaattagat
aaacctgaatcattaatcaaattcgtatctgataggttaggtcatgatagaagatatgct
attgactcttcaaaaattagaagggacttaggctggaggcctaaatatacctttgaagat
gggataatcgaaacgatccattggtacttggataatcaggattggataagtaaggttaaa
tctggtcaatatcaggagtattataataagatatataaagatagatga
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