Metabacillus sp. B2-18: LPC09_00210
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Entry
LPC09_00210 CDS
T09916
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03030
DNA replication
mebz03430
Mismatch repair
mebz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPC09_00210 (holB)
03430 Mismatch repair
LPC09_00210 (holB)
03440 Homologous recombination
LPC09_00210 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mebz03032
]
LPC09_00210 (holB)
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_00210 (holB)
Enzymes [BR:
mebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPC09_00210 (holB)
DNA replication proteins [BR:
mebz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPC09_00210 (holB)
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPC09_00210 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
GFA
Motif
Other DBs
NCBI-ProteinID:
UGB31042
LinkDB
All DBs
Position
41631..42623
Genome browser
AA seq
330 aa
AA seq
DB search
MNKNWQELVTYQPRVMKLLANSIQKQRLAHAYLFEGKKGTGKKDAGILLAKSFFCENLQT
YEPCDNCKNCRRIDSGNHPDVHIVEPDGLSIKKGQIQSLQEEFSKSGVESNKKLYMIIHA
DKMTVNAANSLLKFLEEPNPNTIAILITEQYHKILNTILSRCQLLSFHPLQPIAIQETLE
KSGVAKHIAALVSQLTNDLNAALDLTKDDWFAQARLKVIKLYEVLITRKGQAPIYIHTEW
MNHFHDKDKQDTGLDLLLYLYKDVLSIQIGNEENIIYHDIVQQIKQHALQMTQRSVTEKI
TSILEAKKRLHANVNPQLLMEQLVLTLQEG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaactggcaagaactagtcacatatcaaccacgtgtgatgaagttattagca
aatagtattcaaaaacaacggttagcacatgcctatttgtttgaaggaaagaaagggact
ggaaagaaagatgcgggaattcttttagcaaaaagtttcttttgtgaaaatcttcaaacc
tatgaaccatgtgataactgtaaaaactgtagaagaatagattcaggaaatcaccctgat
gttcatattgtagaaccagatggattatccataaaaaaggggcaaattcaatctttgcaa
gaagagttttcaaagtctggagtagagtccaataaaaagctttatatgattattcatgct
gataaaatgactgttaatgcagctaacagcttattaaagtttttagaagagcctaaccca
aacacaattgccattctaataactgaacagtatcataaaatattaaatacaattctttca
aggtgtcagctgttatcctttcatccattgcagccaattgcaatccaagaaacccttgag
aagtcaggtgtagctaagcatattgctgcattagtgtcgcaactaacaaatgatcttaat
gctgcattggacttaacaaaagatgattggtttgcgcaggctcgattgaaagtgataaaa
ttgtatgaggtccttatcactcgaaaaggacaggcaccaatatatatacacacggagtgg
atgaaccactttcatgataaagataagcaagatacagggttagacttgctattatattta
tataaagatgtcttatctatacaaataggtaatgaagaaaacattatttatcatgacatc
gttcagcaaataaaacagcatgcccttcaaatgacccaaagaagtgtaacagagaagatt
acttctatattagaagctaaaaaaaggcttcatgccaatgtgaatccacaattacttatg
gagcaattggttttaacattgcaggagggataa
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