Metabacillus sp. B2-18: LPC09_00860
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Entry
LPC09_00860 CDS
T09916
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPC09_00860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mebz03021
]
LPC09_00860
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_00860
Enzymes [BR:
mebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPC09_00860
Transcription machinery [BR:
mebz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPC09_00860
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPC09_00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
PASTA
Motif
Other DBs
NCBI-ProteinID:
UGB31150
LinkDB
All DBs
Position
155102..156046
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTSIILNIKKLALKIYSDEEKTLEIDVQGEGSVTASDITHDSDVEI
LNPDLHIATLASDASFRMRLTAKRGRGYTPADSNKREDQPIGVIPIDSIFTPVARVSYQV
EKTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAHKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaaccaaaaatcgaaacggttgaaatcagcgatgatgccaaatat
ggtaaattcgtcgtcgagccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtattcttttatcctcactccctggtgccgctgtaacatcgatccaaatagatggc
gtacttcatgagttttcaacgatcgaaggtgttgttgaagatgttacttcgattatctta
aacattaaaaagcttgctcttaaaatctattcagatgaagaaaagacgcttgaaattgat
gttcaaggcgaaggtagtgtaactgcatccgatattactcatgatagtgatgtagagatt
ttaaatccagatcttcatattgcaactctagcttcagatgctagctttagaatgaggcta
acagctaagcgcggacgtggttatacaccagctgattcaaacaaacgtgaagaccagccg
ataggggttattcctattgactctatctttacaccagtagcgcgtgtttcctaccaagta
gaaaaaacacgtgtaggtcaagttgctaactatgataagttaacgttagatgtttggaca
gatggaagtacagggccgaaagaagcaattgctttaggttctaagatcctaacagaacac
cttaatatctttgtagggcttactgatgaagctcaaaacgcagaaattatggttgaaaaa
gaagaggatcaaaaagaaaaagttcttgagatgacgattgaagaattagatctatctgtc
cgttcatacaactgtttaaaacgtgctggaattaatacagtgcaagagttagctcataaa
acagaagaagatatgatgaaggttcgaaatctaggtcgtaaatctcttgaagaagttaag
gcaaaattagaagaactaggtttaggtcttcgaaaagacgactga
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