Metabacillus sp. B2-18: LPC09_01230
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Entry
LPC09_01230 CDS
T09916
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mebz03021
]
LPC09_01230 (sigB)
Transcription machinery [BR:
mebz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPC09_01230 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
IF2_N
TnsD
KORA
DUF1492
HTH_3
HTH_23
NRBF2_MIT
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
UGB31209
LinkDB
All DBs
Position
221025..221816
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AA seq
263 aa
AA seq
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MAQPSQNMKLTKEEVNELILDFQKTESKVAQLALVEHYTGLVETLAKKYSKGKSFHEDLR
QVGMIGLLGAIRRYDPTVGKPFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKA
AVDKLTNENQRSPQVREIAEYLDVTEEEVLETMEMGKSYQALSVDHSIEADSDGSTVTIL
DIVGSQEQGYEKVNQKLMLQSVLHVLSDREKEIIECTFILNKSQKETGEQLGISQMHVSR
LQRRAIQKLREALSKDMPPELNK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccatctcaaaatatgaagctaactaaagaagaggtgaacgagttaatacta
gactttcagaaaacagaaagtaaagtagcccaattggcactcgttgaacactataccggt
ttagttgaaaccttagcgaagaaatattccaaagggaaaagctttcatgaagatcttaga
caggtgggcatgattggtttactgggcgctattagaagatatgaccctactgttggaaag
ccgtttgaagcttttgccattccaaccataatcggagaaatcaaacgtttcttaagagac
aaaacatggagtgttcatgttccgagaaggattaaagaattaggacccaagattaaggct
gctgtagacaagttaacaaatgaaaatcaacgatctccacaagttagggagatagcggaa
tacctagatgtaactgaagaggaagtattagaaacgatggaaatggggaaaagctaccag
gctttatcggtcgaccattctattgaggctgattctgatggaagtactgttaccattctt
gatattgttggttcgcaagagcaggggtatgaaaaagtgaatcaaaaactaatgcttcag
agtgtattgcatgttttatcagatcgagaaaaggaaattatcgaatgtacgtttattttg
aataaaagtcaaaaagagactggtgaacagttaggtatctctcaaatgcatgtatcaagg
ctacaaaggagagctattcaaaaattaagagaagcactgtcaaaagacatgcccccggag
ttaaataaatga
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