Metabacillus sp. B2-18: LPC09_01735
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Entry
LPC09_01735 CDS
T09916
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03420
Nucleotide excision repair
mebz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPC09_01735 (pcrA)
03430 Mismatch repair
LPC09_01735 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_01735 (pcrA)
Enzymes [BR:
mebz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPC09_01735 (pcrA)
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPC09_01735 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LPC09_01735 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DUF3641
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UGB31280
LinkDB
All DBs
Position
324372..326600
Genome browser
AA seq
742 aa
AA seq
DB search
MQFLSNQLLEGLNDRQQQAVKTTDGPLLIMAGAGSGKTRVLTHRIAYLMTEKQIAPWNIL
AITFTNKAAREMRERIQGILGSGGDEIWISTFHSMCVRILRRDSDRMGINRNFSILDTTD
QLSVIKTILKEKNLDPKKHDPRSLLGSISSAKNELITPEEFEKQAGSHYEQIVSDIYKDY
QKKLRKNQSLDFDDLIMTTIQLFQRVPEVLESYQRKFQYIHVDEYQDTNRAQYMLVKLLA
ARFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPQANVILLEQNYRSTQLILQAANEVI
KQNSNRKAKNLWTENQPGSKITYYRADSESAEGQFVAGKIKQLVDSGQRKLSDIAILYRT
NAQSRIIEEVLLKSNLNYTIVGGIKFYDRKEIKDLLAYLRLIANPDDDISLARVINVPKR
GVGSTSFDKIANYAIDNDLSIFRALEEIEQIGVSARVINALTDFRELIRNLGNMQDYLSV
TELAEEIIEKSGYREMLKQEKTLEAQSRLENIDEFLSVTQTFEKQNDDKSLVAFLTDLAL
VSDIDKLDEEEQEQSDALVLMTLHSAKGLEFPVVFLIGLEEGVFPHSRSLMEEDEMEEER
RLAYVGITRAEQELFLSNAQMRTLFGKTNMNPESRFIREIPSELIENLNEQAKKSVSSFN
AARRQERQEKRPPVSRPVVTPSSTGGEAFSWAVGDKAEHKKWGIGTVVSVKGSGEGKELD
IAFPSPVGIKRLLAAFAPINRV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatttttatcaaatcagttacttgaaggtttgaatgataggcaacaacaagcggta
aaaacaacagatggtcctttattgattatggctggagctggaagtggaaaaacaagagta
ttaactcatcgaattgcttatttaatgacagaaaagcaaatagctccgtggaatatacta
gcgattacgtttacaaacaaagcagcaagagagatgagagagagaattcaagggatcctc
ggttctggcggagatgaaatttggatttctacttttcactcaatgtgtgtaagaatttta
cgtcgtgatagtgacagaatgggaattaatcgtaacttttctattcttgatacgacagat
caattatcagttattaaaaccattttaaaagagaaaaaccttgatccgaaaaaacatgat
cctagaagcttactagggtccattagtagtgccaaaaatgaactgattacaccagaagaa
tttgagaaacaagcgggtagtcattatgaacaaattgttagcgatatttataaggattat
caaaagaagcttcgtaaaaatcagtcgctagattttgatgacctcattatgacaaccatt
caattatttcaacgtgtaccagaagtgcttgaatcttatcaacgaaaatttcaatatata
catgttgatgagtatcaagatacgaatagagcccaatatatgcttgtaaaactattagct
gctcgttttcaaaatttatgtgttgttggtgactcggatcaatcgatttatcgctggcgt
ggtgctgacattgctaacattctttcatttgaaaaagattatcctcaagcaaatgtgatt
ttactggaacaaaactatcgttctacacagttaattttacaagcggcgaatgaagtgatt
aaacaaaattctaaccgtaaagctaaaaatctatggacagagaatcagccgggctccaaa
atcacctattatcgtgctgacagtgaatcagccgaagggcagtttgttgccggaaagatt
aagcagttagttgattcaggtcaaagaaagctttctgacattgcgattttatatcgtaca
aatgctcaatctcgtattattgaggaagttttgctgaagtcgaacttgaattatacaatt
gttggaggtattaagttctacgatcgtaaagagattaaagatttacttgcttaccttcga
ttaattgctaatccagatgatgatattagcttagctcgtgttataaatgtgccaaaacgt
ggtgttggttcaacttcctttgataaaatcgcaaattatgcaatagacaatgacttatca
atctttcgggctttagaggaaattgagcaaattggtgtgagcgcaagagtaatcaatgct
cttacagatttccgtgaattgatacgaaatctagggaatatgcaggattatctgtcggta
acagagcttgctgaagaaattattgagaagagcggatatagagaaatgcttaaacaggaa
aaaacgttagaggcacaaagtcgcttagaaaatatcgatgagttcttatctgttactcaa
acctttgaaaaacaaaatgatgataagagtcttgttgcctttttaactgatttagcactt
gtttcagacattgataaactagatgaagaagagcaggagcaaagtgatgcacttgtatta
atgacgcttcactctgcaaaaggtcttgaattccctgttgtctttttaatcggacttgaa
gaaggtgtcttccctcatagtcgttccttaatggaagaagatgagatggaggaggagcgc
cgtcttgcctatgtaggaattacgagagcagagcaggaacttttcctttcgaatgctcaa
atgcgtacgttatttggtaagacgaatatgaatccagaatctcgctttattagagaaatt
ccaagtgaattaattgaaaatctgaacgaacaagcaaagaaatctgtttcatccttcaac
gcagcacgtcgtcaagaacgtcaagaaaagcgtccacctgtatctagacctgtagtcaca
ccttcatcaacagggggagaagctttttcttgggctgttggtgataaagctgaacataaa
aaatggggaattggtacagtcgtgagtgtaaaaggctccggagaaggaaaggaattagat
atcgcttttccaagcccagtcggaataaaacgactattagctgcatttgcacctattaat
cgggtttaa
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