Metabacillus sp. B2-18: LPC09_02055
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Entry
LPC09_02055 CDS
T09916
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPC09_02055 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_02055 (mutM)
Enzymes [BR:
mebz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LPC09_02055 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPC09_02055 (mutM)
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPC09_02055 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_IS1595
M60-like_N
Motif
Other DBs
NCBI-ProteinID:
UGB31338
LinkDB
All DBs
Position
399951..400760
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AA seq
269 aa
AA seq
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MPELPEMENYKRIFDQKLVGRTIEAVEVTREKSINKPVLEFVDAVQGKTLVAVERRAKHL
IFKLNSGENLLLHLMLGGLMYIGSDQDSPDRTKQVTISFGNDLLFFIGLRLGYLHLLSNE
ELEKDFHDLGPEPLSPDFTLEAFDQSIQKKRGALKTTLVNQSFIAGIGNLYSDEICFEAK
LLPSRKGNELSVQERSALFHAIQTILNRGLTYGGYIDMPVFKTDNLTGSYDHHCYVYNRE
GEPCPRCQSSIIRDEISSRKTFYCVQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagttacctgaaatggaaaattataaacgtatttttgaccaaaagcttgttggt
agaacaattgaagcggttgaagttacaagagagaaatcaatcaataagcctgttttagaa
tttgttgatgctgttcaggggaaaacattagtagcagtggaacgacgggcaaagcatttg
atattcaagctgaattctggagaaaatctattattacatttgatgcttggaggtctcatg
tacattggaagtgaccaggatagtccagatcgcacaaagcaggtcaccatttctttcgga
aatgatttattattttttatcgggctgcgtttaggatatcttcatctattatcaaacgaa
gaattggaaaaggattttcatgatttgggacctgagccacttagtccagacttcacgctt
gaagcttttgatcaaagtatacagaagaaaagaggtgctttaaaaacaaccttagtcaat
caaagtttcattgcaggtattggaaatctttattccgatgaaatttgctttgaagcgaag
ctgttaccatctagaaaaggaaatgagctatcagtacaggaacgctctgcactttttcat
gccatacaaacaattttaaatagaggtcttacgtatggtggatatattgatatgcctgta
tttaaaacagacaatttaacaggaagttatgatcatcactgttacgtctataatagagaa
ggggagccttgccctagatgtcaatcttctatcattcgagatgagatatcatcaagaaaa
acgttctactgcgtacaatgccaaaaatag
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