Metabacillus sp. B2-18: LPC09_04420
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Entry
LPC09_04420 CDS
T09916
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_04420 (addB)
Enzymes [BR:
mebz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPC09_04420 (addB)
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LPC09_04420 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6375
Motif
Other DBs
NCBI-ProteinID:
UGB31734
LinkDB
All DBs
Position
830786..834277
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AA seq
1163 aa
AA seq
DB search
MSIQFILGRSGTGKTETILNEIRDRLFQKPIGRPIIYLVPDQMTFGAEYELIRTPNLGGM
IRAQTFSFSRLAWRVLQETGGMTRHHLSSTGIQMLLRKLVEEYKQDFKVFAKASDKNGFI
EQLEVMLTEFKRYCLSPQELEDFVASAQTEYDRKSLTDKLHDMAILYKQMEIQLSHKYVD
SEDYLKLLAEKVESSSYLQSADIYIDGFHSFTPQEYEVVAALMKHAQNVKIALTADKAYE
DFLPHELHLFQMTGKTYNNILKLATEAGKQVEEPILLKEQHRYAGSRSLQHLEAFYDIRP
TTVFDQEPDVTIYQAANRRSEVEGIAREIQSLIRNGQYRYRDLALLIRNSNDYRDVIEQV
FRDYEVPFFIDQKRSMLNHPLVELIRSTIEIINGYWRYEAVFRAVKTELLFPIEQDKYIM
REDMDLLENYVLSYGIQGSKWTNGDRFRYRRFYSLDDEFVVTDDEKEMEDKLNQLRELIV
QPIQTLHKRLKRSQNGQEMAEALFLYLEELHIPKKLEALRITAEEKGLLLEAREHDQVWQ
AVINLLDEFVEMMAEEPVSLKLFSEMLETGLESMKFSLVPPAIDQVLIADLEKSRFFNVK
CSFIVGVNDGVIPARPKEEGILTEDDREALHYQGVDLAPTARQQLLDENFIIYMALSSSS
EKLYLSYAMADEEGKALLPSVIIKRMEEMFPTIKQQRLLNEPEQLSTTEQLSFIVNQHVT
LSYVTSQLQSWKRGYPIHLLWWDAYNYFVSSDNQQLTQKVLSSLTYENKPEQLETSVSRE
LYGEHIQGSVSRMEKFNSCPFSHFASHGLKLRERQFFKLEAPDIGQMFHSALKLISDRLH
QLKLDWKELTKDQCERLSNDAVEQLAPRLQKEILLSSNRYHYIKRKLQKILARASSILSE
HAKASGFAPVGLELGFGKGGELPPIRFTLPNGCTMEVAGRIDRVDKATGSNGVLLRIVDY
KSSDKNVQLSEVYYGLALQMLTYLDVIISNSKLWLGIEATPAGVLYFHVHDPMIQASSLL
PEEKLDDEIFKKFKMKGLLLGDEEAVKLMDHSLTEGSSSNIIAAGLKKDGGFRSTSSIAS
ESEFELLRHHVRSTFKKIGTNITDGIIDISPYKLKDKMPCTYCEYKSVCQFDESLEENNY
RILKSEKNDEVLKRMREEAGVDE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcaatttattttaggtcgctctggaaccgggaaaacagagacgattttaaat
gaaataagagacaggctgtttcaaaagccaattggccgaccgattatttatctcgtacca
gaccaaatgacgtttggggcagaatatgagttaatacgtacaccaaacttaggtgggatg
attcgtgcacaaacatttagctttagtcgtttagcttggagagtattacaagaaacaggg
gggatgactcgtcatcatttatccagtaccggaattcaaatgctcctccgaaaactcgta
gaagagtataaacaagattttaaggtatttgccaaagctagtgataaaaatggctttatt
gaacagttagaagtgatgttaacagaatttaaacggtattgcttatcacctcaagagtta
gaggattttgtagcaagcgctcaaactgagtatgatcgaaaatctttaactgataagctt
catgatatggctattctctataaacaaatggaaattcagttaagtcataaatacgtggat
tctgaggattatttaaagctattggctgaaaaagttgaaagctcaagttatttacaatct
gctgatatttatattgatggctttcatagctttacgccacaagaatatgaagtagttgct
gccttaatgaagcatgcacaaaatgtgaaaattgctcttactgcagataaggcatatgaa
gattttctcccacatgaattacacttatttcaaatgacagggaaaacgtataataacatt
cttaagctggctactgaagcaggtaaacaagtggaagaaccgatacttcttaaagaacag
catcgctatgctggtagtaggtcgttacaacatttagaagcattttatgatataagacca
acaaccgttttcgatcaagagccagatgtgacgatttatcaggctgcaaatcgccgctct
gaggttgaaggaatcgctagggaaattcaatcacttattaggaatggtcaatatcgttat
cgtgaccttgctctgctcatacgaaattccaatgattatcgcgatgtaattgaacaggta
ttccgtgattatgaagtcccgttttttattgatcaaaagcgttctatgctcaatcatcca
ttagtagagttaatccgctccacaattgaaattattaatggatattggcgatatgaagcg
gtatttcgtgcagtgaaaacagagctcctgtttccaattgaacaagacaaatatattatg
cgcgaagatatggacttgttagaaaattatgttctgtcttatggcattcagggatcaaag
tggacaaacggagaccgttttcgataccgccgtttctattctcttgatgatgaatttgtt
gtcacagatgatgaaaaggaaatggaggacaagctaaatcagttacgagagcttattgtt
caaccaattcaaactttgcataaaaggttaaagcgaagtcaaaatggtcaagagatggca
gaagctttgtttctttatttagaagaattgcatattcccaaaaagcttgaagcacttcgg
attacagcagaagaaaaaggtctgttattagaagcgagggagcatgatcaagtttggcag
gcagttataaatttattagacgagttcgttgaaatgatggctgaagagcctgtgtcttta
aagcttttctcagagatgcttgaaacgggtcttgagtcaatgaaattctcgttagtgcca
ccagctattgaccaggtactgattgcagatcttgaaaaatccaggtttttcaacgtgaag
tgctcatttattgttggagtaaatgatggggttattcctgccagaccaaaggaagaaggc
atattaacagaagacgatcgagaggctcttcattatcagggtgttgatcttgctccaact
gctagacaacagcttcttgatgaaaactttatcatttatatggcattgtctagttcatct
gaaaaattatacctttcctatgcgatggcggatgaagaaggaaaggcattgttgccgtct
gtcatcattaaacgaatggaagaaatgttcccaacaataaagcagcagcgattattgaat
gaacctgagcagctttcaacaacagagcagctatcgttcatcgtaaatcagcatgtaaca
ctttcttacgttacatcacagctgcaatcgtggaaaagaggatatccgattcacttatta
tggtgggatgcttataactattttgtatcatccgacaatcaacaattgactcaaaaggtg
ttaagcagtttaacttatgaaaacaaaccagagcagctagaaaccagtgttagtcgtgaa
ctatatggtgaacatattcaaggaagtgtgtcgcggatggagaaattcaatagctgtcca
ttctctcattttgcttcacatggtttaaagttaagagaaagacagtttttcaagcttgag
gcacctgatatagggcaaatgttccactctgccttgaaactgatttccgatcgcttacat
caattaaagttagattggaaagagttaacgaaggatcaatgtgagcgactttctaatgat
gcagttgagcagcttgcaccaagattacaaaaagaaatcctattaagttcaaatcgttat
cattatattaagcgaaagctacaaaaaattcttgcacgggcttcatccattcttagtgaa
cacgcaaaggcgagtggctttgcaccagtcggcctagagcttgggtttggtaaaggtggg
gaactaccaccaattcgttttacattgccaaatggctgtacgatggaggttgcaggtaga
attgatagggttgataaagcaacaggttcaaatggtgtattgttacgaatcgttgattat
aaatcgagtgataaaaatgttcaactttctgaggtttattatggtttagcgctacaaatg
ctaacctatttagatgttattatctcgaactcaaagctgtggctaggaattgaagctact
ccggctggggtattatatttccatgttcatgatccgatgattcaggcttcatctctttta
ccggaagaaaagctagatgatgaaatttttaagaagtttaaaatgaaaggacttttactc
ggtgatgaggaagcagtgaaattgatggatcattctcttaccgaaggaagcagttcaaac
attattgcagccggtttgaaaaaggatggaggattccgctccacatcatctatagcgagt
gaatctgaatttgagttattacgccatcatgtgcgatccacgttcaagaaaattggaacg
aatatcacagatggaataatcgatataagcccctataagcttaaggataaaatgccatgt
acgtattgtgagtataagtctgtgtgtcaatttgatgaatcgttagaagaaaataactac
cgcatcttaaaaagtgaaaaaaatgatgaggtgttaaaacgaatgagagaggaggctgga
gttgatgagtga
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