Metabacillus sp. B2-18: LPC09_06180
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Entry
LPC09_06180 CDS
T09916
Name
(GenBank) rhamnogalacturonan lyase
KO
K18198
rhamnogalacturonan exolyase [EC:
4.2.2.24
]
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LPC09_06180
Enzymes [BR:
mebz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.24 rhamnogalacturonan exolyase
LPC09_06180
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FIMAH
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
UGB32054
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Position
1222662..1225226
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AA seq
854 aa
AA seq
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MRKRSITNKLLTLSLATPLLLTGLQSDASAASSQANKHVSQSNGVQLEYLDRGLVAANTS
QGIFLSWRLLGTEVDGYSENGLTGVNFNVYRDGKKIATVKDSTNFVDEAGLSSSKYYVKA
VQDGKEIDQSAEATPWSQGYVDLKLQKPADGVTPSGESYSYTANDMSVGDVDGDGQYEFF
VKWDPTNSKDVSQKGYTGNTYIDCYTMDGTLLYRIDLGVNIRSGAHYTQFLVYDFDGDGK
SELMFKTAPGTKVIKYDKNGKVKSEKFITMLKEDQKAGYSNSDDYRMSSEDYYNHVVEMF
KNWHNHEEVVNGNWPITLEECFGIEKQYDYPLSTEDAQSLADYFIDEYAPSRSSRNDLRD
FEGFIVKGPEYLSVFNGETGDEMETIRYKYERHDDGLMWGDYAMSRIEPGNRVDRFLAGV
AYLDGKNPAAIFSRGYYTRATMVSYTWDGKHLKEEWDVDSGWTPMTNPFNDGPHGRLGTS
EEYGTLTTQGAHSLSTADVDGDGKQEIIYGSSTIDHDGSLLYSSSDVMPEESATPGVTAG
LGHGDALHVADIDPNRDGLEIFMVHEGGRYAPYGYALRDAKTGEVIYGGYTGKDTGRGMV
GDVNPEQPGLETWAVGLWTADGTKINEKAPGTNMNIKWAADMTTQIINGAIENTPTIGDW
QKGTVLTASGTRTNNYTKGNPSLVADIFGDWREELLVRTEDSQLIRIYLSTEVTDRKLHT
LMHDPQYRTGIAWQNVGYNQPSYTSYYFASDTNWEDVSVPEIKLPGELNELNHTLNLFIE
NGEVNGSVEAQLKNSLKQAQHHAEKGSYKKGIQFIEKFIKQLDHRKKKDHITENAKSTLK
NQAELIIENWQELK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacgttctattacaaataaactattaacgttatcactggcaacacccctcctt
ttaacaggattacaaagtgatgcctcagctgcatcttcacaggcaaataaacatgtttct
caaagtaacggggttcaactagagtaccttgatagaggactggttgccgcaaatacatca
caaggaatctttttaagctggcgccttttaggaactgaagttgacggatactcggagaac
ggtttaactggagtcaactttaatgtttaccgagatgggaaaaaaatagcaacagtaaaa
gatagtacgaattttgtagacgaagccggtttatcatcttctaaatattatgtaaaagct
gttcaggatggaaaggaaattgatcaaagtgcagaagcaacaccttggagccaaggctat
gttgatttaaaacttcaaaagccagcagatggagttactcctagtggagaatcctattct
tatacggcaaatgatatgagtgttggtgatgttgatggtgacggacaatacgaatttttt
gtgaaatgggatccaacaaattcaaaagatgtttcacaaaaggggtatacaggtaatacc
tatatagattgttatacgatggatgggactttgctatatcgtatcgatttaggtgttaac
attcgttcaggagctcattacacacagtttttagtttacgattttgatggagacggtaag
tctgaattaatgtttaaaacagctccaggtacgaaagtgattaagtatgataaaaatgga
aaagtaaaatctgagaaatttattacaatgttaaaagaagatcaaaaagccggttatagc
aactcagatgattacagaatgagtagtgaagactattataatcacgtagtagagatgttt
aaaaattggcataaccatgaagaagttgtaaatggtaattggcctataacgttggaagaa
tgctttggaattgagaagcaatatgattatccgctttctacagaggatgctcaaagttta
gcagactattttattgatgaatacgctcctagtaggagttctcgtaacgatttaagagac
tttgaaggttttattgtaaaaggtcctgaatatttaagtgttttcaatggtgaaacagga
gatgaaatggaaaccattcgttacaaatatgaacgccatgatgatggacttatgtggggc
gattacgcaatgtcacgcatcgagcctggaaatcgggttgatcgctttttagcgggagtt
gcttatttggatgggaaaaatccagcagctattttctcacgaggttattatacaagagca
acaatggtttcatatacttgggatggaaagcaccttaaagaagaatgggatgttgatagt
ggttggacaccaatgacaaatccgtttaatgatggaccacatggacgtctaggtacgagt
gaggagtatggtaccttaacaacacaaggtgcacattctttaagtacagcagatgtagat
ggagatggcaaacaagaaattatctatggctcatctacaatcgatcatgatggttcacta
ttatatagctctagtgatgtcatgccagaagaaagtgcaactccaggagtaacagcaggc
ctaggtcacggtgatgcactacatgttgcagatattgatccaaaccgagatggactagag
atctttatggttcatgaaggtggacgatatgcgccgtatggctatgcgttaagagatgct
aaaactggtgaagttatttatggcggttatactggtaaagataccggccgagggatggtt
ggagatgttaatccagagcaaccaggtttggaaacttgggctgttggtctatggaccgca
gatggaacaaagattaatgaaaaagcccctggaacaaatatgaatatcaagtgggctgct
gatatgacaactcaaattattaatggagctattgaaaatacaccaacgataggcgattgg
caaaagggaacagtgctaacagcttctggaacaagaacaaataattacacgaaaggaaat
ccatctttagttgcagatattttcggggattggagagaagaacttcttgtccgaacagaa
gatagccagttaattcgaatttacttaagtacagaggtgacagatcgcaagcttcacacg
ctcatgcatgacccacaatatcggactggaatcgcgtggcaaaatgttggttataatcaa
ccttcttatacaagctattatttcgcttcggatacaaactgggaagatgtttctgtgcca
gagataaagctaccaggtgaattaaatgagctaaatcacactctgaatctttttattgaa
aacggagaagtaaatggatcagttgaagcacaattaaaaaattcgttaaaacaagctcaa
catcatgcagagaaaggctcttacaaaaaaggtattcagtttatcgaaaagtttattaaa
caactagatcatagaaagaagaaagatcatattactgaaaatgctaaatcaactttaaaa
aatcaagcagaactgattatcgagaattggcaggaactaaaataa
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