Metabacillus sp. B2-18: LPC09_09815
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Entry
LPC09_09815 CDS
T09916
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz02020
Two-component system
mebz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LPC09_09815
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LPC09_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mebz03021
]
LPC09_09815
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mebz02035
]
LPC09_09815
Transcription machinery [BR:
mebz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPC09_09815
Bacterial motility proteins [BR:
mebz02035
]
Flagellar system
Flagellar assembly proteins
Stator
LPC09_09815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
NirdL-like_HTH
HTH_Tnp_ISL3
IF2_N
UPF0122
DUF7096
Put_DNA-bind_N
DUF4460
Motif
Other DBs
NCBI-ProteinID:
UGB32697
LinkDB
All DBs
Position
1954612..1955379
Genome browser
AA seq
255 aa
AA seq
DB search
MTLMTLTDEQVIWQKWIDVRDSHAGDALIKKYMPLVSYHVQRISIGLPKNVNKDDLMSLG
LFGLYDALEKFDPNRDLKFDTYASFRVRGAIIDGLRKEDWLPRSSREKAKRVEAAIDKLE
QKHLRNISTKEIANELGLTEDEVIGVMNEGFFANVLSIDDQLFDQDDGESIGFTVKDDNQ
VTPEEKMINDELISQLSEVITQLSEKEQLVISFFYKEELTLTEIGQVMNLSTSRISQIHS
KALFKLRKILENVIH
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacactaatgacactaaccgatgaacaagtaatttggcaaaaatggatagatgtacga
gattctcatgctggtgatgcgctcatcaagaaatatatgccccttgtttcttatcatgtt
caaagaatttctattggacttccaaagaatgtaaataaagacgatttgatgagcttaggc
ttgtttgggttatatgatgcattagagaaatttgacccaaatcgtgatttaaagttcgac
acgtatgcttctttccgggtgcgaggagcaatcatagatggcctaagaaaagaagactgg
ctaccacgaagttcacgtgaaaaggctaaacgagtagaagcggcgattgataaattagag
caaaaacatttgcgaaatatttccacgaaagaaattgcaaatgaacttggcttaacagaa
gatgaagttattggtgttatgaatgaaggtttctttgcaaatgtattgtctattgatgat
caattgtttgatcaagatgatggcgaaagtattgggtttactgtgaaagatgataaccag
gtaacaccggaagaaaagatgattaatgatgaattaatcagtcagttatccgaagttatc
actcaattaagtgaaaaagagcagcttgttataagcttcttttacaaagaagaattaact
ttaacagaaattggtcaagttatgaacctatcaacttcaagaatctcacaaattcattcg
aaagcgttgtttaaattaagaaaaatattagaaaatgtaatacattaa
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