Metabacillus sp. B2-18: LPC09_09915
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Entry
LPC09_09915 CDS
T09916
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mebz03016
]
LPC09_09915 (truB)
Enzymes [BR:
mebz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPC09_09915 (truB)
Transfer RNA biogenesis [BR:
mebz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPC09_09915 (truB)
Prokaryotic type
LPC09_09915 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF3108_like
Motif
Other DBs
NCBI-ProteinID:
UGB32717
LinkDB
All DBs
Position
1976171..1977091
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AA seq
306 aa
AA seq
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MEGVLLLNKPAGMTSHDCVARMRRLAKTRKVGHTGTLDPDVTGVLPICLGRATKIVEYLT
AASKTYEAEVTIGFSTTTEDASGEIVKEQSVQSPISEEKVKLVLNSMVGTIEQVPPMYSA
IKVNGKKLYEYARAGIEIERPARTITINELVLLGDVHNEDNLTKFRFRVTCSKGTYVRTL
AVMIGEKLDYPAHMSHLIRTKSGNFRIEDCLTFEEIESAIENNALQSKLLPIGKALYDLP
KLKIHDTLAEKVKNGAVLELPSQFKDIEVGAPIVVYDDDDRCLAIYAKHPTKTDLMKPTK
VLLNEA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgttcttttactaaataagcctgctggtatgacatctcatgattgtgtcgca
agaatgcgaaggctggcaaaaacaaggaaagtcggtcatacaggcacgttagatccagat
gtaactggcgtactccctatatgtcttggtagggcaactaagatcgtagaatatttaaca
gctgcttcaaaaacgtatgaagctgaggtaacaattggtttttctacaacaactgaggat
gcatctggtgaaattgttaaagagcaaagtgtacaatcacctatttcagaggaaaaagtt
aagcttgtattgaattcaatggttggtacaattgagcaagttcctccaatgtattctgct
attaaagttaacgggaaaaaactttatgagtatgcaagagctggtatagagattgaaagg
ccggcaaggaccattacaataaatgagcttgtgcttttaggtgatgttcataatgaagac
aatctcacaaagttccggttccgtgttacttgttctaaaggtacttatgtccgaacattg
gcggtaatgataggtgaaaaattagactatccggcacatatgtcacatttaatcagaaca
aaatccggaaattttagaattgaagattgtttaacatttgaagaaatagaaagtgcgatt
gaaaacaatgcgttacagagcaaattactgcctataggtaaagcactatatgatttgccg
aaactgaaaatccatgatactctagcagagaaagtgaaaaatggtgcagtgttagaatta
ccgtcgcaatttaaggacattgaagtgggtgctccaattgttgtctatgatgatgacgac
cgctgtctagctatctatgcaaagcatcccactaaaacagatctgatgaaaccaacaaag
gtactgctaaatgaagcgtaa
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