Metabacillus sp. B2-18: LPC09_14775
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Entry
LPC09_14775 CDS
T09916
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03030
DNA replication
mebz03430
Mismatch repair
mebz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPC09_14775
03430 Mismatch repair
LPC09_14775
03440 Homologous recombination
LPC09_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mebz03032
]
LPC09_14775
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_14775
Enzymes [BR:
mebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPC09_14775
DNA replication proteins [BR:
mebz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPC09_14775
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPC09_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UGB29024
LinkDB
All DBs
Position
2926418..2927167
Genome browser
AA seq
249 aa
AA seq
DB search
MPDDIKILKYIFWDQLFFKHRMNKMIQLPEYDYAVTSIERFVESQKGLMKEDLRSCTFTI
FDLETTGFFPNMGDEIISIGAIKVKNFEILYDEAFYTIMKPINKIPKTVEELTGLSGEIL
AKAQSFPVGIRKFLDYCEGSILVAHPATFDIEFMKTVLNQWNFPNFSVDFLDSHLIANDL
YTGERNYLDNLVERFKISERERHHALNDAVMTANVFIKLLQQYDRSFIKNPKQLLDTIEE
NRIINDGLS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgccagatgatataaaaatattaaaatatatattttgggatcaattattttttaaacat
cgcatgaacaaaatgatccagcttccagaatacgattatgccgttacttcaattgaacgc
tttgtagaaagtcaaaaaggattaatgaaagaagatttacgctcctgtacatttacaatt
tttgatttagaaacaactggttttttcccaaacatgggtgatgaaatcatttctatcggt
gcgatcaaagtcaaaaattttgaaatcctgtatgatgaggcgttttatacaattatgaaa
ccaatcaacaaaattccgaaaacagtggaagaactaacaggattatcaggagaaatatta
gctaaggctcaatcttttccagttgggatacgtaaatttctcgactactgtgaaggaagt
attttggttgcccaccctgctacatttgatatcgagtttatgaaaaccgttcttaatcaa
tggaatttcccaaacttttcagttgattttctggattcccatttgattgcaaatgactta
tatacaggagaaagaaattatttagataatcttgtagaacgatttaaaatatccgaacga
gaacgtcatcatgcattaaatgatgctgtcatgactgcaaatgtttttatcaaacttcta
cagcagtatgatcggtcatttataaaaaatcctaaacaactattagatacaatcgaagaa
aacaggataattaatgatggtttatcttaa
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