Metabacillus sp. B2-18: LPC09_17600
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Entry
LPC09_17600 CDS
T09916
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mebz03019
]
LPC09_17600
03009 Ribosome biogenesis [BR:
mebz03009
]
LPC09_17600
Enzymes [BR:
mebz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPC09_17600
Messenger RNA biogenesis [BR:
mebz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPC09_17600
Ribosome biogenesis [BR:
mebz03009
]
Prokaryotic type
rRNA helicases
LPC09_17600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
DUF3545
Flavi_DEAD
DUF6354
Motif
Other DBs
NCBI-ProteinID:
UGB29546
LinkDB
All DBs
Position
complement(3451559..3452875)
Genome browser
AA seq
438 aa
AA seq
DB search
MEQTKFERFSLKPFIIEAITKELKFFEPTEIQERLIPSILRGESAIGQSQTGTGKTHAYL
LPLINQVDTDRQEVQVVITAPTRELASQIYNEVGKLISFSPDNISAKLFIGGTDKQRTIE
KLKTQPQIVVGTPGRINDLVKENALVINRVRSFVVDEADMILDMGFIKDVDMVAGQMPEQ
LQILVFSATIPEKLKPFLKKYLANPKFTHVAPKQATAAKIEHILVPVRHRDKKQLVHDML
KDFNPFLAIVFTNTKKNADELADALIEKGLKVGRIHGDLSPRDRKKMMKQINELEFQYVV
ATDLAARGIDIKGISHVLNYEIPTNDLEFYIHRVGRTARAGSSGIAVTLYETSDEDALNK
LEKQGIEFINKDFVGGEWRDIDDRKRRQNRKRVTDEVDALAKSIVQKPKKVKPGYKKKMG
REMEQIKKRKRRLDKKQK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacaaaatttgagcgtttttcattaaagccttttattatagaagcgatcaca
aaagaattaaaattctttgagccaactgagatacaggagcgattaattccctctatttta
agaggtgaaagtgcgattgggcaatctcaaactggtacaggaaaaacacatgcttactta
ctaccattaattaatcaagttgatactgatcgacaagaagtacaagtcgttataacggct
ccgacaagagaattagcatcacaaatttacaatgaggttggaaaactaatttctttttca
ccggataatatatctgcaaagctttttataggtggtacagacaaacaaagaacaatagaa
aaattaaaaacccaaccacaaatcgttgtaggtacaccggggcgaataaatgacctcgta
aaagaaaacgcactagttatcaatcgggttcgttcatttgtggttgacgaagcagatatg
atcttagatatgggatttataaaagatgtggatatggttgcagggcaaatgcctgaacaa
ttacaaattttagttttttctgcgactattccagaaaagctaaaaccatttttgaaaaaa
tacttggcaaatccaaaatttacacatgtagctcctaaacaagcgactgcagcaaagatt
gaacatattcttgttccagttagacatcgcgataagaaacaacttgttcatgatatgctt
aaggattttaatccttttttagccattgtttttacaaacacaaaaaagaatgcggatgaa
ttagcagatgcactcattgaaaaaggtttaaaggtcggaagaatacatggtgatttatcc
ccgcgtgatcggaaaaaaatgatgaagcagattaatgagctagaattccaatatgttgtt
gcaacagacttagccgcacgtggaattgacattaaaggaataagtcatgttttaaactat
gaaattcctactaatgatttagaattctatattcatcgtgttggaagaacagctcgtgca
ggtagttcaggtattgctgtgacattatatgagacttctgatgaagatgcgttaaacaag
cttgaaaagcaaggtattgaatttattaataaagattttgttggtggagaatggcgtgac
attgatgatagaaaacgtcgtcaaaatcgaaaaagagtaacagacgaggtagatgcttta
gcgaaaagtattgttcaaaaacctaaaaaggtaaaaccaggctataaaaagaagatgggc
cgagaaatggaacaaattaaaaagagaaaaagaaggttagacaaaaaacaaaaatag
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