Metabacillus sp. B2-18: LPC09_18865
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Entry
LPC09_18865 CDS
T09916
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mebz
Metabacillus sp. B2-18
Pathway
mebz03030
DNA replication
mebz03430
Mismatch repair
mebz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPC09_18865 (dnaE)
03430 Mismatch repair
LPC09_18865 (dnaE)
03440 Homologous recombination
LPC09_18865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mebz03032
]
LPC09_18865 (dnaE)
03400 DNA repair and recombination proteins [BR:
mebz03400
]
LPC09_18865 (dnaE)
Enzymes [BR:
mebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPC09_18865 (dnaE)
DNA replication proteins [BR:
mebz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPC09_18865 (dnaE)
DNA repair and recombination proteins [BR:
mebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPC09_18865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UGB29783
LinkDB
All DBs
Position
complement(3715469..3718822)
Genome browser
AA seq
1117 aa
AA seq
DB search
MPFVHLQVKSAYSLLSSAARLDKLVNKAKECKFNAIALTDFHVMYGAVAFYKLCQENGIK
PILGMTVTIIDEQHETDMTAVLLAENNEGYQNLLKISSALQTKSPEGLPDRWLKSYHSGL
IAIIPGQMFMESFEKEQFDQAIVLLKKYQTLFGENSIYLGTQRVSLEDESLHKYLLNISS
EVNIPMVATNNVSYIEKEDYLAQQCLIALKRGEKLSDFHVDQKGTHENYLKPAAEMVSLF
EEFPDALENTLKIAARCKVNLNLGVTHLPKYPAPKNQNADEYLEELCFKGLNTRFENPDS
IYLQRLSYELDVIKRMNFSDYFLIVWDFMKYAHEHGILTGPGRGSAAGSLVSYVLRITDV
DPIKHRLLFERFLNPERITMPDIDIDFPDTRRDEVIAYVANKYGKLHVAQIITFGTLAAK
AAIRDVGRVMGASPKETDVLSKLIPSRPGITLQEAFKESQALQKLITENERNKKIYETAL
KLEGLPRHTSTHAAGVVLSDQPLTNIVPIQEGQQDVYLTQYSMDYLEDLGLLKMDFLGLR
NLSLIENIMKSIQRVEGKRVDLTNISYQDEKTFDLLSQGDTTGVFQLESEGMRSVLKRLK
PSSLEDIVAVNALYRPGPMENIPLFIDRKHKRKSTTYLHPSLEPILQNTYGVIVYQEQIM
ELASTIAGFTLGEADLLRRAVGKKKKDILDQEREHFVSGCTRNGYSQQVANSIYDLIVKF
ANYGFNRSHAVAYSMIAYQLAFLKANYPLHFLTALLTSVSGNEDKVAQYVREAKRKGFAV
LPPSVNKSEFAFLVEGASIRYNLTSIKNVGIAAIKEIFHARKKKPFTDLFDFCIRVSMKI
VTRKTMEQLIFAGAMDEFTIDRATLLASLDVAIEHAELMTPSDESQFDLFLEEEFNLKPK
YIEVEPFKIEEKLRFEKESLGLYFSIHPVEMYRSNLQGVRAVTIDDLSSNVDRKVSIGAL
VANVRTIRTKKGEVMAFLLLGDETGDIDAVLFPQTYSKFGEKVRDGMIFYLEGKVERRQD
KLQFIVQQIKELEHLPAVSKHAKLFVKIEKQFSDQQKLLDVKKILSRFNGSIPVYLYYEH
DKRTIQLPEEFSVSATEECLTDLMNLLGQNNVVLKQE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgttcaccttcaagtgaaaagtgcatacagcttgctctcaagtgcagcaaga
ttagataaattagttaataaggcgaaagaatgtaaatttaatgcaatagcgttgactgat
tttcatgtgatgtatggggctgtagctttttataagctatgtcaggaaaatggaataaag
cctattttaggtatgacagttacaatcatagatgaacaacatgagaccgacatgacagct
gtactactagctgaaaataacgaggggtatcagaatttattaaagataagcagtgctctt
caaacaaaatcacctgaagggcttccagatcgatggttaaaaagctatcattctggatta
atagccattatcccaggacaaatgttcatggaaagctttgaaaaagaacagtttgatcaa
gcaattgttttattaaaaaaatatcaaactttatttggtgaaaactcaatatacttagga
actcagagagtatccttagaagatgagtccctacataaatatttactgaatattagtagt
gaagtgaatattcctatggtggcaacgaataatgttagctatatcgaaaaggaagattac
cttgctcagcaatgcctaattgcattaaaacgtggtgaaaagctttctgattttcatgtt
gaccaaaaaggaacacatgaaaattacttaaagcctgcagctgaaatggtatctttattc
gaggagttccctgatgcattagaaaatacattaaagatagctgctcgttgtaaagtgaat
cttaatctgggtgttactcatctaccaaaataccctgctcccaaaaaccaaaatgctgat
gaatatcttgaggagctttgtttcaaaggattaaatacaagatttgaaaaccctgactct
atctatttacaaagactaagctatgagttagatgtaataaaaagaatgaattttagtgat
tattttttaattgtatgggactttatgaaatacgctcatgagcatggcatattaacaggt
ccagggcgaggttctgctgctggctctcttgtttcatatgtgctgcgaattacggatgta
gatccaattaaacatagattactttttgaaaggtttttaaatccagagcgtattacgatg
cctgatattgatattgactttccagatacaagacgtgatgaagtaatagcttatgtagca
aacaaatatggcaaattacatgttgctcaaattattacctttggaacgttagcagccaaa
gcagctattcgtgatgtggggagagtaatgggagcttcacctaaggaaacagatgtctta
tcgaagctgatcccatctcgaccgggaatcacccttcaagaagcatttaaagaatctcag
gcactacagaaattaattactgaaaatgaacgaaataaaaaaatctatgaaacagcttta
aaactagaaggcctcccaaggcatacttctacacatgcagcaggtgttgttttaagtgat
caacctttaacaaatattgtcccaattcaagaagggcaacaggatgtgtacttaacacag
tactctatggattacttagaagatctcgggcttttaaaaatggattttttaggcttaaga
aatctttctttaatcgagaatattatgaaatctatacaacgtgttgaaggaaaacgagtt
gatttgacgaacatatcctatcaagacgaaaaaacatttgatcttttatcccagggagat
acaacaggagtttttcagcttgaatccgaagggatgagaagtgttttaaaacgtcttaaa
cctagcagtcttgaggatattgttgctgtaaatgcattatacagacctggtccgatggaa
aatattccactctttattgacagaaaacataaaagaaaaagcacaacatatttacacccc
tcactggaaccgattttgcagaatacctatggtgttatagtttatcaggagcaaataatg
gaattggcttctactattgcaggatttactctaggggaagcagacttattaagaagagcc
gttgggaagaaaaagaaagatatactagatcaagagagggaacattttgtctcgggctgt
actagaaacggttatagtcaacaagtggcaaactcaatttatgatttaattgttaagttt
gccaactatggatttaaccgaagtcatgcagttgcatatagtatgattgcttaccaatta
gcctttttaaaagcaaattaccctctccattttttaacagctttattaacaagtgtaagt
ggaaatgaagataaagttgctcaatatgttcgagaggcgaagcgtaaaggtttcgcggtg
ctgccaccttctgtaaacaaaagtgagtttgcatttttagtagaaggtgcaagtattcgc
tataatttaacatctataaaaaatgtaggaatagcggctattaaggaaatctttcatgca
agaaagaaaaaaccttttactgacttatttgatttttgtataagggtatcaatgaaaatt
gtgactagaaaaacaatggagcaacttatttttgcaggtgcaatggatgagtttactatt
gatcgtgcaactttgcttgcaagccttgatgttgccattgagcatgcggagctaatgact
ccatcagatgaaagtcaatttgatctctttttggaagaagaatttaatctaaagccaaag
tatattgaagtagagccatttaaaattgaagaaaaacttagatttgaaaaagaatctcta
ggtttatacttttccattcatcctgttgaaatgtatcgttcaaaccttcaaggggtccgt
gctgttactattgatgatttatcttcaaatgtagatcgaaaggtttcaattggggcttta
gtagcaaatgtacgaacaatacgtaccaaaaaaggtgaggttatggcttttttactactt
ggagatgaaacaggagatattgacgctgttcttttccctcaaacttattcaaagtttggt
gaaaaggtgagggacgggatgattttctatctagagggaaaagttgaaagaagacaggat
aaacttcagtttattgttcagcaaataaaagaactagaacacttaccagccgtttctaaa
catgcaaagctctttgtgaaaattgagaagcagttctcagatcaacaaaagttgctagat
gtaaagaagatactaagtcgttttaacgggagtatccctgtctacctgtattatgagcat
gataagaggactattcaattacctgaagagttctcagtttcagctacagaagagtgttta
acagatttaatgaatttacttgggcaaaataatgttgtactaaaacaggagtag
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