Metabacillus sp. B2-18: LPC09_19245
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Entry
LPC09_19245 CDS
T09916
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mebz
Metabacillus sp. B2-18
Brite
KEGG Orthology (KO) [BR:
mebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mebz03016
]
LPC09_19245 (thpR)
Enzymes [BR:
mebz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LPC09_19245 (thpR)
Transfer RNA biogenesis [BR:
mebz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LPC09_19245 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UGB29858
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All DBs
Position
complement(3796558..3797139)
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AA seq
193 aa
AA seq
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MKKHYFIAVPIEEHHQQLIQNWITTYKNKLPFQSWVHPNDYHITLAFLGDVGEDEKLELL
VEKIKQTVQFVPQFELFLKGIDVFGKPDFPRIFWAGLKESTNLQQFQKQVFDRCQEVGFQ
LDKKPFRPHITLARKWKSEEPFRKWSQLDHAFEGSSSHFKVEKIHLYQTNLNKIPKYEVV
ETFLLQTLESVRE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacattattttattgctgtacctattgaagaacatcatcaacagcttattcaa
aattggattacaacctataaaaataaattgccctttcaatcatgggtccatccaaatgat
tatcatattacattagcttttttaggtgatgtaggggaagatgagaaattagagttatta
gtcgaaaaaatcaaacagactgttcaatttgttccacaatttgaattgtttttaaaagga
atcgacgtttttggtaagcctgattttccaagaattttttgggcaggtttaaaagaatca
acgaatctacagcagttccaaaaacaagtgtttgacagatgtcaagaagtggggtttcaa
cttgataaaaagccttttcgtccacacattacgttagctagaaaatggaagtcagaagag
ccttttagaaaatggtcacaactggatcatgcttttgaaggaagttcatctcattttaaa
gtggagaaaattcatctgtatcaaacaaatctgaataaaattccaaagtatgaggtggtt
gaaacatttcttttgcaaactttggagagtgtaagagaatga
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