Methylophaga frappieri: Q7C_1132
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Entry
Q7C_1132 CDS
T02056
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mec
Methylophaga frappieri
Pathway
mec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q7C_1132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_1132
Enzymes [BR:
mec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Q7C_1132
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q7C_1132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
SLFN-g3_helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
PhoH
UvrD_C
DEAD
AAA_16
TIP49
AAA_5
AAA
NTPase_1
Herpes_Helicase
nSTAND3
AAA_7
GvpD_P-loop
TraI_hel_assoc_N
CbiA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AFJ02287
UniProt:
I1YH94
LinkDB
All DBs
Position
complement(1160601..1162340)
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AA seq
579 aa
AA seq
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MFRALSLLRQCGFSEIACQFADFIERKTQGEPLTTSLTAGLLTEAVSQGHVCLNLHQVPA
VTKGVSDYLPEQVATWTEILKTSRVVGEPGEYRPLILTDAGQVYLYRFWLDERDVASLIR
LRLKPVENVDFTQLNQDLINWKSHTVGTDWQKVAVAMAVSRQFGVISGGPGTGKTSIVLK
ILQCLEQQSNSLQIGLAAPTGKAAARLQQAIRQPGYEVKTLHRLLGITEQNHFGRYNHKR
TLPLDVLIIDEASMIDISLMAKLMRAMSEQTRLILLGDSQQLASVESGAVLANLSEGQQG
VFSDTFIEQFSCLGLEKASSNTPELLIDSFVRLKHSYRFSDESAIGKLSQLINQGDSGSV
INILTLPDSDISWRQTTSDDIHEVVTAGYQAYIETVENQASHEKILHAFERYRVLSALRQ
GPQSVASINQMMSRYLGRRGWRAADSYYVGRPILITQNQYRQQLFNGDIGIVLPDETGQL
KACFKVAETFQWVSLNRLPAHETVFAMTIHKSQGSEFDEVSVLLPDEFSPVLNRELLYTA
LTRAREKVAFLSSELTLRQTIETRHHRESGLSEQLGING
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtttagggcgctcagcttattacgccaatgtgggtttagtgagattgcttgtcaattt
gctgattttatcgaacgtaaaacacaaggtgaaccactcacgaccagtttgacggcagga
ttattaaccgaggcggtttcccaaggccatgtttgtctgaatttgcaccaggtacctgct
gtgaccaaaggggtatccgattatttgcctgaacaggtcgctacctggactgagatatta
aaaaccagtcgtgtggttggggagccgggagagtatagaccgctgattttgacagatgct
ggccaggtttatttatatcgattttggttggatgagcgtgatgttgcctcacttattagg
cttcggctcaagccagttgaaaacgttgatttcacgcaactgaatcaagatttaatcaac
tggaagtcacataccgttggtactgactggcaaaaagtcgcagtggctatggcggttagt
cgccaatttggggtgatttccggtgggccaggtacaggaaaaacctcgatcgtattaaag
attttgcagtgtctcgagcagcaatccaattcacttcaaattggtcttgcggccccaaca
ggtaaagcagcagcacgacttcagcaggctattcgtcaaccaggttatgaggttaaaaca
ttacatcggctactcggtataacggaacagaatcactttggtcgctataaccataagcga
acattgcctttagatgtcctcattattgatgaggcatccatgattgacattagcctgatg
gcaaaattgatgcgtgcaatgtctgaacaaacgcggcttattttgctgggtgatagtcaa
cagcttgcctctgtggagtctggtgctgttttagccaatctcagtgaggggcagcaaggt
gttttttcagatactttcattgagcaattttcttgtcttggccttgaaaaagcttcatca
aacacgcccgaattgcttatagatagttttgtcagactgaaacatagctaccgattttct
gatgaaagtgcgattggcaagctgtcccagctaattaatcaaggcgacagtggctcggtt
atcaatattctgacacttcctgattcagatatatcatggcggcaaaccacgtcggatgat
attcatgaagtcgtgactgccggttatcaggcttatattgagacggttgaaaaccaagca
tcacacgagaaaatactccatgcttttgaacgttatcgcgtgttatctgcgctacgccaa
gggccacagtctgttgcaagcattaatcaaatgatgagccgttatttgggacggcgagga
tggcgggctgcggactcgtattatgtcggaaggccaattttaataacccagaatcagtat
cggcaacagttgtttaatggggatattgggatcgttttacctgacgagacaggtcaactc
aaagcctgttttaaagtggcggagacatttcaatgggttagtttgaacagattacctgct
cacgagaccgttttcgctatgaccattcataaaagtcagggctcggagtttgatgaggtg
tctgtactgttacctgatgagtttagccctgttttgaatcgtgaattgctctacacggcg
ctaacacgggcgcgggagaaagtggcctttttgagcagcgagctgacgttgagacaaaca
atcgaaacccgtcatcatcgcgaaagcggcctatccgaacagttagggattaatggctag
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