KEGG   Methylophaga frappieri: Q7C_1134
Entry
Q7C_1134          CDS       T02056                                 
Name
(GenBank) Exodeoxyribonuclease V gamma chain
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
mec  Methylophaga frappieri
Pathway
mec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Q7C_1134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mec03400]
    Q7C_1134
Enzymes [BR:mec01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Q7C_1134
DNA repair and recombination proteins [BR:mec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Q7C_1134
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C UvrD_C RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AFJ02289
UniProt: I1YH96
LinkDB
Position
complement(1165821..1169033)
AA seq 1070 aa
MLNIVYSNNTQNLASHLAQQVLKAPLSPFEQETILVQSNKLSRWLTLFLAQQHGIAANLV
FPFPSAYIWSVFRQLWPDIPLDSPYSKSALVWRIYALLPRYSDVAGFESVSTYLGETNEP
LKRYQLAERLADNFDQYLMFRPDWIRQWEKGQTDNWQSQLWYALTEHDTEPKHRAYLLEK
LHDKLKNSNTPPEGLPQRLHLFGLTALPPVYLQTFTLLARYIDITIYTLSPSEYYWGELI
ETKQHHRVALQQSPDAVPYEPDHPLLASLGKQGMTFFRQLQEIEHQSISYFEPPESGQML
AELQADMYWLTVAEKSPVIETDDSIMVHSCHSPMREMEVLYDQLLAMFERDPDLSPADIV
VMTPDIGVYAPWIEAVFGSAKGDQFIPFSITDYQSQSESQLIQTFLSLLQLPSSRLDVEM
VLSALACPAVQKQFLLDETAIEWVRTWCRHTHIRWGFDQQDKQRLNLPATDANTWRAGLN
RLMLGFAMPLTVPNQPVRLFDGELGLDGIQGEKATVAAALCAFIEKLNLWREVLDKPQTI
LDWHSHLNHCLDTFFDTSGRDEQQLDAELMAVRKQLDKLLESADQASFADEVGIELMHSW
LSSHLEELNGAERFMGYGVTFCGMVPVRSIPFDVVCLVGMNDADFPRRQPGLSFDLLTQD
HREGDRSRREDDRYLFLEAILSAKKRLYLSYVGASIVDNNDIPPSVLLSDFQDFLSMRFE
TQSGGDILDQIKTKHPLQPFSYRYFDGMDDKLFSFNASQCPPQIVSPKADWFASPLPEAE
ESWRHISVDQLARFFAHPAKFLLRERLHIQLQPDEQVLETREPFQLDGLSSWQLRQELLE
VNLASAPVAAYRDIVRAKGVLPHGYIGDAWFDQEVDKVMDFSERLEQLRSESVAFTLPFE
FCVERFQLEGQLEAVTEQGLLRYRLAKLKGKDVMAAWLDHLVLNHLHPEGIALETRLITE
DNMLHFLPVNNVTPVLNKLLDYYWQGCHQPLKFFDKASLAYFRGVIAGKGDAAIEQARKV
WSSGNLHVTSEQDDPYYQLLYPDSPLDDLFTEIAEQIYQDIVSHLQGGKL
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgctcaatattgtttacagtaataatacgcaaaaccttgcttcgcatcttgcccagcaa
gtgctgaaagcgcctttgtccccatttgaacaagaaaccatattggtacaaagtaataaa
ttatcccgatggctgacgttatttcttgctcagcaacatgggattgctgcgaatctcgtt
tttccttttccgtcagcgtatatctggagtgtttttaggcaactgtggccagatattcca
ctcgattcaccgtatagtaaatctgctttagtctggcgtatttacgcattattacctcgc
tatagtgatgttgctggctttgagtcagtttctacctacttgggcgagacgaatgagcca
ttgaagcgctatcaattagccgaaaggttggcggataattttgaccaatacctcatgttt
cgaccagactggattcgacaatgggagaaaggtcagactgacaactggcaaagccagtta
tggtatgccttaactgagcatgatactgagccgaagcatcgcgcttacttgctcgaaaag
ttacatgacaaactgaaaaacagtaacacgccccctgaaggcttacctcagcgtttgcac
ctgtttggtttgacagcgctaccgcctgtttacttgcaaacgttcacattattggcccga
tatattgatattacgatctatacgctgtcgccgagtgaatattactggggggagttaata
gagactaaacagcatcacagagtggccttgcagcagtcaccggacgctgttccttatgag
cctgatcaccctttgttagccagtcttggtaagcaagggatgacattttttcgacaacta
caagagatcgagcaccaatccataagttattttgagcctcctgaatcaggacagatgctg
gcagagttacaggcagatatgtattggttaacggtggctgaaaagtcacccgttatagaa
accgatgattctattatggttcatagttgtcatagtccgatgcgcgaaatggaggtgcta
tacgatcaattgttagctatgtttgagcgcgatccagacttatcgccagcggatattgtc
gtgatgacaccagacattggcgtctatgcaccttggattgaggctgtatttggttcagca
aagggcgatcagtttattccttttagtattacagattatcaaagccaatctgaaagtcag
ttaattcagacttttttgagtttattgcaactgccatcgtctcgtcttgatgttgaaatg
gtgctgtctgcattggcatgtcctgctgttcaaaagcagtttttattagatgaaacggca
attgaatgggttcgcacctggtgtcgacatacccatatccgctggggatttgatcagcaa
gataagcagagattgaatcttcctgcaaccgatgcaaatacttggcgtgcgggtctaaat
cggctgatgctaggctttgctatgccattaaccgtgcccaatcaaccggtgcgattgttt
gatggagagctgggactggatggcattcaaggtgaaaaagcgaccgttgccgctgcactt
tgtgcattcattgaaaagctgaacttatggcgtgaagtcttagacaagccgcagactatt
ctcgattggcacagtcacctcaatcattgcttggatactttttttgatacgagtggccgt
gatgaacagcagttagatgctgagttaatggctgttaggaaacagcttgataagctgctg
gaaagtgctgatcaagccagttttgctgatgaggttggcattgaattgatgcatagttgg
ctttcatcgcatctagaagagctgaatggtgccgaacgatttatggggtacggtgtgacg
ttttgtggcatggtcccagtgcgtagtataccttttgatgttgtttgtctcgtgggtatg
aatgacgctgactttcctcggcgacaaccgggtttgagctttgatttattgacgcaagat
catcgtgaaggggataggtctcgccgggaggatgatcgttacctttttctggaagcgata
ttgtctgcaaaaaaaagactttatttgagttatgtcggggcgagtattgtcgataataat
gatatcccaccttcggtattgttaagtgattttcaagattttctctcaatgcggtttgaa
acacagtcaggcggcgatattcttgatcaaataaaaaccaaacatccgcttcagccgttt
agttatcggtattttgatgggatggatgacaaattatttagttttaatgcatcacagtgt
ccacctcaaatagtttctccaaaagcagattggtttgcctcgcccttacctgaggctgag
gaatcttggcgacatatcagcgtggatcaattagcccggttttttgctcacccagcgaaa
tttttgctacgggaacggttacatattcagttgcaaccggatgagcaagtcttggaaact
cgtgaaccttttcagcttgatgggctgagtagctggcagctacggcaagaattactcgag
gtcaatttggcctcggctccggtcgcagcgtatcgtgatattgtcagggccaaaggggtg
ttgcctcatggctatattggtgatgcctggtttgatcaggaagtggataaggtgatggac
ttttctgagcgacttgaacagcttcgatcagagtccgtcgcgtttaccttaccatttgaa
ttttgtgttgagcgtttccaacttgagggacaactagaagcggtcacagaacaaggctta
ttacgttatcggttggccaaattaaagggtaaagatgtgatggcagcttggctggatcac
ttggtgttaaatcacctgcatccggagggtattgcattggaaacaagattgattaccgaa
gataacatgctgcattttctgcctgtaaataatgtaactccggtactcaataagttattg
gactattactggcaaggttgtcaccaacccttgaaattttttgataaggccagccttgct
tatttcagaggcgttattgcgggtaaaggtgacgcggccattgagcaagccagaaaagtc
tggtcctcaggcaatcttcatgtgacttcagaacaggatgacccctattaccagttactt
tatcccgactctccgcttgatgacctgtttacagaaattgccgagcaaatttatcaagat
attgtgtcgcatttgcaaggtggcaaattatga

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