Methylophaga frappieri: Q7C_1134
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Entry
Q7C_1134 CDS
T02056
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mec
Methylophaga frappieri
Pathway
mec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q7C_1134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_1134
Enzymes [BR:
mec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Q7C_1134
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q7C_1134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AFJ02289
UniProt:
I1YH96
LinkDB
All DBs
Position
complement(1165821..1169033)
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AA seq
1070 aa
AA seq
DB search
MLNIVYSNNTQNLASHLAQQVLKAPLSPFEQETILVQSNKLSRWLTLFLAQQHGIAANLV
FPFPSAYIWSVFRQLWPDIPLDSPYSKSALVWRIYALLPRYSDVAGFESVSTYLGETNEP
LKRYQLAERLADNFDQYLMFRPDWIRQWEKGQTDNWQSQLWYALTEHDTEPKHRAYLLEK
LHDKLKNSNTPPEGLPQRLHLFGLTALPPVYLQTFTLLARYIDITIYTLSPSEYYWGELI
ETKQHHRVALQQSPDAVPYEPDHPLLASLGKQGMTFFRQLQEIEHQSISYFEPPESGQML
AELQADMYWLTVAEKSPVIETDDSIMVHSCHSPMREMEVLYDQLLAMFERDPDLSPADIV
VMTPDIGVYAPWIEAVFGSAKGDQFIPFSITDYQSQSESQLIQTFLSLLQLPSSRLDVEM
VLSALACPAVQKQFLLDETAIEWVRTWCRHTHIRWGFDQQDKQRLNLPATDANTWRAGLN
RLMLGFAMPLTVPNQPVRLFDGELGLDGIQGEKATVAAALCAFIEKLNLWREVLDKPQTI
LDWHSHLNHCLDTFFDTSGRDEQQLDAELMAVRKQLDKLLESADQASFADEVGIELMHSW
LSSHLEELNGAERFMGYGVTFCGMVPVRSIPFDVVCLVGMNDADFPRRQPGLSFDLLTQD
HREGDRSRREDDRYLFLEAILSAKKRLYLSYVGASIVDNNDIPPSVLLSDFQDFLSMRFE
TQSGGDILDQIKTKHPLQPFSYRYFDGMDDKLFSFNASQCPPQIVSPKADWFASPLPEAE
ESWRHISVDQLARFFAHPAKFLLRERLHIQLQPDEQVLETREPFQLDGLSSWQLRQELLE
VNLASAPVAAYRDIVRAKGVLPHGYIGDAWFDQEVDKVMDFSERLEQLRSESVAFTLPFE
FCVERFQLEGQLEAVTEQGLLRYRLAKLKGKDVMAAWLDHLVLNHLHPEGIALETRLITE
DNMLHFLPVNNVTPVLNKLLDYYWQGCHQPLKFFDKASLAYFRGVIAGKGDAAIEQARKV
WSSGNLHVTSEQDDPYYQLLYPDSPLDDLFTEIAEQIYQDIVSHLQGGKL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattgtttacagtaataatacgcaaaaccttgcttcgcatcttgcccagcaa
gtgctgaaagcgcctttgtccccatttgaacaagaaaccatattggtacaaagtaataaa
ttatcccgatggctgacgttatttcttgctcagcaacatgggattgctgcgaatctcgtt
tttccttttccgtcagcgtatatctggagtgtttttaggcaactgtggccagatattcca
ctcgattcaccgtatagtaaatctgctttagtctggcgtatttacgcattattacctcgc
tatagtgatgttgctggctttgagtcagtttctacctacttgggcgagacgaatgagcca
ttgaagcgctatcaattagccgaaaggttggcggataattttgaccaatacctcatgttt
cgaccagactggattcgacaatgggagaaaggtcagactgacaactggcaaagccagtta
tggtatgccttaactgagcatgatactgagccgaagcatcgcgcttacttgctcgaaaag
ttacatgacaaactgaaaaacagtaacacgccccctgaaggcttacctcagcgtttgcac
ctgtttggtttgacagcgctaccgcctgtttacttgcaaacgttcacattattggcccga
tatattgatattacgatctatacgctgtcgccgagtgaatattactggggggagttaata
gagactaaacagcatcacagagtggccttgcagcagtcaccggacgctgttccttatgag
cctgatcaccctttgttagccagtcttggtaagcaagggatgacattttttcgacaacta
caagagatcgagcaccaatccataagttattttgagcctcctgaatcaggacagatgctg
gcagagttacaggcagatatgtattggttaacggtggctgaaaagtcacccgttatagaa
accgatgattctattatggttcatagttgtcatagtccgatgcgcgaaatggaggtgcta
tacgatcaattgttagctatgtttgagcgcgatccagacttatcgccagcggatattgtc
gtgatgacaccagacattggcgtctatgcaccttggattgaggctgtatttggttcagca
aagggcgatcagtttattccttttagtattacagattatcaaagccaatctgaaagtcag
ttaattcagacttttttgagtttattgcaactgccatcgtctcgtcttgatgttgaaatg
gtgctgtctgcattggcatgtcctgctgttcaaaagcagtttttattagatgaaacggca
attgaatgggttcgcacctggtgtcgacatacccatatccgctggggatttgatcagcaa
gataagcagagattgaatcttcctgcaaccgatgcaaatacttggcgtgcgggtctaaat
cggctgatgctaggctttgctatgccattaaccgtgcccaatcaaccggtgcgattgttt
gatggagagctgggactggatggcattcaaggtgaaaaagcgaccgttgccgctgcactt
tgtgcattcattgaaaagctgaacttatggcgtgaagtcttagacaagccgcagactatt
ctcgattggcacagtcacctcaatcattgcttggatactttttttgatacgagtggccgt
gatgaacagcagttagatgctgagttaatggctgttaggaaacagcttgataagctgctg
gaaagtgctgatcaagccagttttgctgatgaggttggcattgaattgatgcatagttgg
ctttcatcgcatctagaagagctgaatggtgccgaacgatttatggggtacggtgtgacg
ttttgtggcatggtcccagtgcgtagtataccttttgatgttgtttgtctcgtgggtatg
aatgacgctgactttcctcggcgacaaccgggtttgagctttgatttattgacgcaagat
catcgtgaaggggataggtctcgccgggaggatgatcgttacctttttctggaagcgata
ttgtctgcaaaaaaaagactttatttgagttatgtcggggcgagtattgtcgataataat
gatatcccaccttcggtattgttaagtgattttcaagattttctctcaatgcggtttgaa
acacagtcaggcggcgatattcttgatcaaataaaaaccaaacatccgcttcagccgttt
agttatcggtattttgatgggatggatgacaaattatttagttttaatgcatcacagtgt
ccacctcaaatagtttctccaaaagcagattggtttgcctcgcccttacctgaggctgag
gaatcttggcgacatatcagcgtggatcaattagcccggttttttgctcacccagcgaaa
tttttgctacgggaacggttacatattcagttgcaaccggatgagcaagtcttggaaact
cgtgaaccttttcagcttgatgggctgagtagctggcagctacggcaagaattactcgag
gtcaatttggcctcggctccggtcgcagcgtatcgtgatattgtcagggccaaaggggtg
ttgcctcatggctatattggtgatgcctggtttgatcaggaagtggataaggtgatggac
ttttctgagcgacttgaacagcttcgatcagagtccgtcgcgtttaccttaccatttgaa
ttttgtgttgagcgtttccaacttgagggacaactagaagcggtcacagaacaaggctta
ttacgttatcggttggccaaattaaagggtaaagatgtgatggcagcttggctggatcac
ttggtgttaaatcacctgcatccggagggtattgcattggaaacaagattgattaccgaa
gataacatgctgcattttctgcctgtaaataatgtaactccggtactcaataagttattg
gactattactggcaaggttgtcaccaacccttgaaattttttgataaggccagccttgct
tatttcagaggcgttattgcgggtaaaggtgacgcggccattgagcaagccagaaaagtc
tggtcctcaggcaatcttcatgtgacttcagaacaggatgacccctattaccagttactt
tatcccgactctccgcttgatgacctgtttacagaaattgccgagcaaatttatcaagat
attgtgtcgcatttgcaaggtggcaaattatga
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