Methylophaga frappieri: Q7C_1242
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Entry
Q7C_1242 CDS
T02056
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mec
Methylophaga frappieri
Pathway
mec03420
Nucleotide excision repair
mec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q7C_1242
03430 Mismatch repair
Q7C_1242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_1242
Enzymes [BR:
mec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7C_1242
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q7C_1242
MMR (mismatch excision repair)
Other MMR factors
Q7C_1242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFJ02392
UniProt:
I1YHJ9
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All DBs
Position
1270478..1272634
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AA seq
718 aa
AA seq
DB search
MDVSELLNDLNKPQRDAVAAPLGHARILAGAGSGKTRVLVHRIAWLIQAEGLSSANILAV
TFTNKAAAEMRGRIEEMLGYPIGGMWVGTFHGLAHRLLRLHWQDVNLPQSFQILDSDDQQ
RLLKRLIRSLNLDEAQWPAKQAQWFINAQKDEGLRAANIQVGNDPYSKTMQQIYQAYEQA
CERAGVVDFGELLLRCHELWLKRTDILAHYQQRFSSILVDEFQDTNTIQYAWLRLLAGEQ
GHLFIVGDDDQSIYGWRGAKIENIQKFHQDYPQANTVRLEQNYRSTGNILAAANAVIANN
SERLGKQLWTADDDGDPVQIYQAFNERDEAQYLVQMVQQWVNQGGERSQCAVLYRSNAQS
RVIEEALMQAAMPYRVYGGLRFFERAEIKDVLAYLRLIANRRDDAAFERVVNTPTRGIGA
ATLTQLRQIARETDQTLWQTATDMVEQNSLAARAANALSGFLTLIDSLTPIDDSMALHEL
TQLVIDESGLKAFYSKDKSEKGQGRLENLDELINATREFMRADTEEDMPLLDAFLAHAAL
EAGEMQAGAWQDCVQLMTLHSAKGLEFPVVFMVGMEEGLFPGQKSAEDPMRLAEERRLCY
VGMTRARKTLYLMHTESRYLYGQEMHPRPSRFLAEVPVEHCHEIRSRQPAGHLSGLTSRQ
QTVSENGYHPGQQVMHQKFGPGVILDTEGSGTHARVQVNFKQAGSKWLVLAYANLETL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccgaacttttaaacgatctgaataaaccgcaacgtgacgcagtggccgca
ccacttggtcatgctcgaattttggctggtgcgggcagtggtaaaacgagggtattagtt
catcgcatcgcgtggttgatccaagccgaagggttatcatcggcaaacattctcgccgtc
acctttaccaacaaagcagctgccgaaatgcgtggccgtattgaggagatgctgggttat
cccataggcggtatgtgggttggcacctttcatgggctagcacaccgcttactgcgcctg
cattggcaagatgtcaatttgccgcaaagctttcaaattcttgatagcgatgatcagcag
cgcttgttaaaacggctgattcggagtttaaatctagatgaagcacagtggccagccaag
caagcgcaatggtttattaatgcacaaaaggatgaaggccttcgtgctgcaaacatccag
gtcggcaacgatccctactctaaaaccatgcagcaaatttatcaggcatatgaacaagcc
tgtgaacgagcgggagtcgttgattttggcgagttattgctgcgatgtcatgagttatgg
ttgaaacgtactgacattcttgcccactatcagcaacgtttttcttccattctggttgat
gagtttcaggataccaatactatccagtatgcctggcttcgtttactggctggtgagcaa
ggccatttatttatcgtcggcgatgatgatcagtccatctatggctggcgtggcgccaaa
atcgaaaatattcagaaatttcatcaagattatcctcaggccaataccgttcgtctggag
cagaactatcgctctaccggcaatattctggcagccgccaatgcggtcatcgccaataat
agtgaacgtctgggcaaacagctgtggactgcggatgatgatggtgatccggtgcagatt
tatcaggcttttaatgaacgcgatgaagcccaatacctagtacaaatggttcagcaatgg
gtgaaccaaggtggcgaacgcagtcaatgtgcggtgctgtatcgttcgaatgcacaatcg
cgtgtcattgaagaagccttaatgcaagctgccatgccctatcgggtttatggcggactg
cgtttctttgaacgcgccgaaatcaaggacgtgctggcttatctccgtctgattgcaaac
cgacgtgatgatgccgcttttgaacgcgtcgtcaatacccccacacgcggtattggtgct
gcaactctaacccaactacgccaaatcgccagagaaaccgatcaaaccttgtggcaaacc
gccaccgatatggttgaacaaaatagcttagccgccagagcagcgaatgcattatcaggt
tttttgaccttaattgactcgctaacccccattgatgacagcatggcattacatgagctg
acacaactggttattgatgaaagtggtttgaaggcgttttacagtaaagataaatcggaa
aaaggtcagggtcggctcgaaaatctggacgaacttatcaatgcgacacgcgaatttatg
cgtgccgatacagaagaggacatgccgcttttagatgcctttttggcgcatgccgcgctt
gaagccggtgaaatgcaagccggcgcatggcaagattgtgtccaactgatgaccttacat
tcggcgaaaggactggaatttcccgttgtcttcatggttggtatggaagaaggcttattt
cctggacaaaaatcagccgaggatccaatgcgtctcgctgaagaacgtcgcctctgctat
gttggcatgacgcgggccagaaaaacgttatatctcatgcataccgaatcacggtacctt
tatggtcaagaaatgcatcctcgaccatcgcgttttctggcagaagtaccggttgaacat
tgtcatgaaattcggtcacggcaacctgctgggcatttatctggcctgacgagccgacag
caaaccgtcagtgaaaatggctatcatcctggccaacaagtgatgcatcaaaaatttggg
cccggtgtgattctggatactgaaggtagtggcactcacgcccgtgttcaggttaatttt
aaacaggcaggtagtaagtggctggtacttgcttacgccaatctggaaacgctttga
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