Methylophaga frappieri: Q7C_16
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Entry
Q7C_16 CDS
T02056
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mec
Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mec03021
]
Q7C_16
Transcription machinery [BR:
mec03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Q7C_16
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
AAA_34
DUF7427
Cas3-like_C_2
ASXH
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFJ01201
UniProt:
I1YE58
LinkDB
All DBs
Position
complement(11951..14746)
Genome browser
AA seq
931 aa
AA seq
DB search
MPEENFAVGQRWVSHTESELGLGCISEVQGRSIEVSFPAADAIRRYAVNNAPLARVRFEP
NDIVFDQSGNQLIVQDYQEHNNCLIYACQNDQGTLQVLPEQDLQNSIQFRDPGKRLFIGQ
IDKNKQFVLRRKALEYDHLSQKSPLYGLMGARVQLLPHQIYIAAQAAQRLSPRLLLADEV
GLGKTIEAGLIMHQQWLAGRARRVLVIVPEPLLHQWLVEMLRRFNLHFTLIDAERFTAIH
DSGENPFESNQLILTSMKTLLSDTVISSAVTDAQWDMLVVDEAHHLQWQAEKASADYQLV
AKLSELVPAVLLLTATPQQTGLASHFARLRLLDPARFSSLAQFEQEEQAYQQITMLIECL
LTATDVQSLMQSTHFNALTEKLDQHTLQKLLEPETFAIARQQAFRQLLDYFGTGRLLYRN
TRQNVGDFPKRILQRYPLPEDTTEQPWPESDPRIDWLLSWLQSFKPAKALLICQQAEMAS
ELEAFLRVRHGLRTAVFHENMSLLQRDRAAAYFAEQESGAQLLICSEIGSEGRNFQFCHD
LVCLDLPQHPDILEQRIGRLDRIGQRHPVTIHVPYIEHSAQHHLLDWYDKGMDAFSEVQT
IGENLYQQFSAQLQSVMVSPQDDVAIKALIRETRQQYQILKTQEQTGREKLLAWHSFDPA
EAENLLAELESASRPIELADFISDFCDAFGIDHQSHSADTVILMPSEQMQQQDLPALPEE
GITGTFQRHKALSREDIAFFSWEHPLIRSAIDTVLSHELGNTAFCTLTDERFPAGTLLIE
SLCYFDIPAPPGLHSQRYLPCQYRRLVLDEKGRQLTESLPSEILDPLAGRIDKPTARQLV
SHARNQIELLIRQTWQTLQHDTQKWINSANHAVEQEINAEVSRLETLQSIQGNSLKAEIS
LWQHRQSQLLSAISTGQWRLDAIRVIIVTNN
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaagaaaattttgctgttggtcaacgttgggtcagtcataccgagtctgaactg
ggtttaggttgtattagtgaagtgcagggacgttctatcgaagtcagctttccggctgct
gatgctattcgccgctacgccgtcaataacgcccctttagctcgtgttcgttttgagccc
aatgacattgtatttgatcagtctggtaaccaactgattgtgcaagattatcaggagcat
aataactgcctgatttatgcctgtcagaacgaccaaggcacgttacaggttttgccagaa
caagatttgcaaaatagcattcaatttcgtgatcccggtaaacgtttatttattggtcaa
atcgataaaaacaaacaatttgtattgcgtcgcaaagcactggaatatgaccatctcagc
caaaaaagtccgttatatgggctgatgggtgccagagttcaattattaccacatcagata
tacattgctgcacaggctgcccagcgtttatctccacgattgctgttagccgatgaagtt
ggtttgggaaaaaccatcgaagccggtctcatcatgcaccaacaatggctggctggcaga
gcccgccgggtattggtaattgtgcctgagccgttattacatcaatggctggttgagatg
ttgcgtcgatttaatctgcatttcaccttaattgatgccgagcgatttaccgcaattcat
gatagtggcgaaaacccttttgaaagtaatcagttgattctgaccagcatgaaaacactg
ctgtctgacactgttattagttcggcagtaaccgacgctcaatgggatatgctggttgtt
gatgaagcccatcatctgcaatggcaggccgaaaaggcgagtgcagattatcaattagtg
gcgaaactgagtgagcttgtaccagcagtactgctgttgaccgccaccccgcagcagacc
ggactggccagccattttgctcgattgcggctgctggatccggctagattttccagcttg
gcccaatttgagcaggaagaacaggcttatcaacagattacgatgttgattgagtgcttg
ttgactgcaactgatgttcaaagtttgatgcagtcaacgcatttcaatgcgctgactgaa
aagctggatcaacacaccttacaaaaattgctcgaaccggaaacctttgcaatcgccaga
caacaagcgtttcgacaactcctcgattactttggtactggccgcttgctgtaccgcaat
acccgccaaaatgtaggggactttcccaaacgcattttacaacggtatccgctaccagaa
gacacaacagaacaaccgtggcctgagtcagatccacggattgattggctgctcagctgg
ttacagtcgtttaaaccagcaaaagcgttgctgatttgtcagcaggcagaaatggctagc
gaactggaagcctttttacgcgttcgtcatggtctgcggacagccgtttttcatgaaaat
atgagtttgctacagcgcgacagggcagccgcttattttgccgagcaagaatccggtgct
caattactgatttgctctgaaatcggtagtgaaggtcgtaattttcaattctgtcatgac
ctcgtttgtttagatctgcctcagcatccggatattctggagcaacgcattggtcgccta
gatcgcattggtcagcgtcacccagttaccattcatgttccttatatcgaacatagtgca
caacatcacctgcttgattggtatgacaaggggatggatgcattcagcgaggtacagacc
atcggcgaaaatctctaccaacaattttcggcacaattacagtctgtcatggtttcgccc
caagatgatgttgctatcaaggcgttgatccgtgaaacacgccagcaatatcaaatctta
aaaacgcaggaacagacaggccgcgagaaactactggcatggcattcttttgatccagcc
gaggcagaaaacctgctagccgaattggaatctgccagcagaccaattgaactggctgac
tttatttcggatttctgtgatgcctttggtatagatcatcagtcacacagtgctgatacc
gttattctgatgccaagcgagcaaatgcagcaacaagatttacccgcgttacctgaagag
ggcattaccggcacatttcaacggcacaaagccttgtcacgtgaagatatcgcttttttt
agttgggaacaccccttaattcgtagtgcgattgataccgttttaagtcacgagctgggt
aataccgctttttgcacattaacagacgaacgatttcctgctggtacgttactcatcgaa
tcactttgttattttgatattccagcaccacccggattacatagccaacgctatttacct
tgccaatatcgccgtttagtcctagatgaaaagggccgtcaattgactgaaagtttgcct
agcgaaatattagatccgctcgctggacgcattgataaacccacggcaagacaactggtg
agtcatgcccgcaaccaaattgaactgttaattcgtcaaacttggcagaccttacagcac
gatactcaaaaatggataaactcggcaaatcacgctgtcgagcaggaaataaacgcagaa
gtcagccgattggaaacactgcaatctattcaaggaaactcgctaaaggctgagataagc
ttatggcagcacagacaatcacagctgttatcggcaatttcaacgggccaatggcgtctg
gatgcgatccgagtcattattgtgaccaataattaa
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