Methylophaga frappieri: Q7C_1659
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Entry
Q7C_1659 CDS
T02056
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mec
Methylophaga frappieri
Pathway
mec03030
DNA replication
mec03430
Mismatch repair
mec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q7C_1659
03430 Mismatch repair
Q7C_1659
03440 Homologous recombination
Q7C_1659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mec03032
]
Q7C_1659
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_1659
Enzymes [BR:
mec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q7C_1659
DNA replication proteins [BR:
mec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q7C_1659
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q7C_1659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFJ02807
UniProt:
I1YIR4
LinkDB
All DBs
Position
1662631..1664094
Genome browser
AA seq
487 aa
AA seq
DB search
MALSNGFPEKMVLLDCETTGAHANHHRITELALIFVENGRITDHWQQLFNPKQIISDWIT
NLTGISNEMVADQPVFEMLAETLFEKLSGFVLVAHHARFDYRFLSAEFRRSGIDFTSPTL
CSVKLSRALYPNQKKHGIDAIVSRLGLTIANRHRAMDDTKVIVSLFEQISRDHDSGTIAD
ACRQVMQCPRLPSQLDTAEIDKLPNSPGIYEFYDAQGGLLYIGKSVNIKQRVLSHFADTK
TARHQEIQQQLAHINFITTPSDFGAQLLENQLIKSKIPRYNRRQTKAKKLFQFALHKDAQ
GYQRLRIEMADLQQLSQLSTRYGLFRSQRQAKQKLLQIVQEQQLCPQLTGLEPTHKGTCF
NYQLKKCRGACHGIESANRYNLRLNIALLGLKNQAWPWSGPVIVREKSVSDESIEVHYHL
LDQWLYLGRVKDAHEAQHKLESETNTPRHFDLDACRIQIRFLTKLRPANLDVLTLTAFSE
YDSQPWH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcgaatggcttcccggaaaaaatggtattgctggattgtgaaacaacgggg
gcacatgcaaatcatcaccgtatcactgagcttgcgctcatctttgttgaaaatggccga
ataacagatcactggcaacagctttttaatccgaagcaaattatctccgactggattaca
aacctgactggcattagcaacgagatggtggctgaccagcctgtttttgagatgcttgca
gagacattgtttgaaaagctctctgggtttgttttggttgcccaccatgcgcgttttgac
taccgttttttatccgccgaatttcgaagaagcggtattgattttacgtcgccgaccttg
tgctcagtaaagttaagccgggcgctttatcctaatcaaaaaaaacatggtatcgatgct
atcgtctctcgattaggtttaaccatagcgaatcgtcatcgtgccatggacgacactaaa
gtgattgtgtctctgtttgagcagataagccgtgatcacgatagcggaactattgctgat
gcttgccgacaggtcatgcaatgcccccgtctacccagtcagttggatacagctgaaatc
gacaagttgccaaacagtccaggcatatatgagttttatgacgcgcagggcgggctgctg
tacatcggtaaatccgtcaatattaagcaacgtgttcttagccattttgctgataccaaa
acagcacgtcatcaagaaattcagcaacaactcgcacacatcaacttcattactacccca
tctgatttcggcgcgcagttactggaaaatcagttaattaaatcgaaaataccgcgttac
aaccgacgtcaaactaaagccaaaaagttatttcaatttgcactccacaaagatgctcaa
ggatatcagcgcctcaggatcgaaatggctgatttacaacagctttcacaattgtcaacg
cgttacggcctgtttcggagtcaacgccaagccaagcaaaaattgttacaaattgtgcaa
gaacaacagctatgtccgcagttaactgggctcgaacccacccataaaggcacttgcttt
aactatcaattaaaaaaatgtcgtggtgcatgtcatggcatcgagtccgctaatcgttac
aacctgcgtttgaatatcgcgcttttaggtcttaaaaatcaggcatggccctggtcaggg
cctgttattgtgcgggagaaatctgtctcagatgagagcatcgaagtacattatcactta
ctcgaccaatggctgtatctagggcgtgtaaaagatgcgcatgaggctcaacacaaactc
gaaagcgagaccaacacgcctcgtcattttgatttggatgcctgccgaattcaaattcgc
tttttgactaaactccgtccggcaaaccttgacgttctgaccttgacggccttttcagaa
tacgacagccaaccctggcattag
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