Methylophaga frappieri: Q7C_1935
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Entry
Q7C_1935 CDS
T02056
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mec
Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mec03032
]
Q7C_1935
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_1935
Enzymes [BR:
mec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q7C_1935
DNA replication proteins [BR:
mec03032
]
Prokaryotic type
DNA Topoisomerases
Q7C_1935
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q7C_1935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFJ03076
UniProt:
I1YJI3
LinkDB
All DBs
Position
complement(1951267..1953549)
Genome browser
AA seq
760 aa
AA seq
DB search
MGNKLVIVESPAKAKTIKKYLGNNVEVLASYGHVRDLLPKEGAVDPENDFAMKYQVIDRN
SKHVDAIAKALKKADSLYLATDPDREGEAISWHLYELLKKKGALKDKTTHRVVFHEITKQ
AVNDAVANPRELSMDLVNAQQARRALDYLVGFTLSPLLWKKVRRGLSAGRVQSPALRMIV
ERELEIEAFKAQEYWTIEADAQTSGSAFQAKLTHYQGEKLSQFSIDNTEQAESVVSKLNQ
AADGKLLVTNVEKKQRKRNPAAPFTTSTLQQEASRKLGFGAQRTMSVAQQLYEGVDTGEG
AVGLITYMRTDSVTLAAEAVSEVRELISERYGAKAVPAKPQEYKTKSKNAQEAHEAIRPT
SALRTPEEMKAYLSVDQLKLYTLVWQRTVASQMIHATLNTVAVDLGCGQGNTFRANGSTV
VNPGFMQVYLEGQDDKKADKDENLLPAMEKGEVVSLDKIRPEQHFTEPPPRYSEASLVRS
LEEHDIGRPSTYASIISTLLQREYVELINKRFHPTDVGRVVGKFLVDHFTRYVDYSFTAK
LEDELDAVSRGEEEWIPLLRSFWGPFKSQVETKDKSVQRSDVTQELLDENCPKCGKQLSS
RLGRSGRFIGCTGYPDCDYTRNMDGEETTASEPEKVEGRQCPKCDSDLIFRTGRYGKFIG
CSSYPKCKHIESLEQPTNTGVDCPQCKKGEILTRKSRRGKVFYSCSEYPKCDYALWNEPL
NEACPNCEWPILTLKTTKSKGTEKVCPQKDCGFSEKVESV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaactggttattgtcgagtcgcctgccaaggccaagaccatcaaaaaatac
ctgggcaacaatgtcgaggtcctggcttcctatggccatgttcgtgacttgcttccaaaa
gaaggggcggtcgatccagaaaatgatttcgccatgaaataccaggtgattgaccggaat
agcaagcatgttgatgccattgccaaagcgttgaaaaaagccgattctctctacttggcg
acggatcctgatcgtgaaggagaggccatttcctggcacttgtatgagctgctcaagaag
aaaggggcactcaaagacaaaaccacacaccgagttgtttttcatgaaataaccaagcaa
gcggtcaacgatgccgttgccaatccgcgcgagctatcgatggatttggttaatgcgcag
caggccagaagggcgttagattatttagttggatttaccttgtcccccctgttgtggaag
aaagtccgacgcggcttatcagcaggtcgggtgcaaagtccggcactgcgcatgattgtt
gagcgagagctggaaattgaagctttcaaggcacaagaatattggacgattgaagccgat
gctcagacgagtggttccgcatttcaagccaagctgacgcattatcaaggtgagaaatta
tcgcaattcagcattgataataccgagcaggcagagtccgttgtcagtaagttaaatcaa
gcagctgatggcaagctactggttactaatgttgagaaaaaacagcgtaaacgtaacccg
gcagcgccctttaccacctccacattacaacaggaagcgtcccgtaaactcggctttggc
gcacagcgaacgatgagtgttgcacagcagctatatgagggtgtcgacactggtgagggc
gcggtaggtctaataacctacatgcgtacagactcagtcacattggcggccgaagcggtc
tcagaagtgcgtgaactgataagtgaacgctatggtgccaaagccgtcccggcaaagcct
caagaatacaaaaccaaatcaaaaaatgcgcaagaggcgcacgaagccattcggccgact
tccgctttacgaacacctgaagaaatgaaagcgtatttgtcggtggatcagttgaagctc
tataccttggtttggcaacgtacggtcgccagtcaaatgattcatgcgacgcttaatact
gttgcggtggacttggggtgtgggcagggtaatactttccgtgccaacggctcgacggtt
gttaatcctggctttatgcaagtttacctggaaggtcaggacgacaaaaaagcggataaa
gacgagaatctgctgccagcaatggagaaaggtgaggtagtcagcctagacaaaattcgc
ccagaacagcatttcactgagccaccaccccgctacagtgaagcgagtcttgttcggagt
ttagaagagcatgatattggtcgcccctcaacctatgccagtattatctcgaccttatta
cagcgtgagtatgtcgaactcatcaacaagcggtttcacccgactgatgtcggacgggtt
gtgggtaagtttctggtcgatcactttacccgctacgtggattacagttttaccgccaaa
cttgaagatgaacttgacgccgtctctcgcggcgaagaagagtggatcccgctgctgcgt
agcttttgggggccgttcaaaagtcaggttgaaaccaaggataaatcagtccaacgcagt
gacgtcacgcaggagctgctggacgaaaactgtccaaagtgtggtaagcagctatccagt
cgtctgggtcggagtggccgctttatcggctgtaccggttatccggattgtgattacacc
cgaaacatggatggagaagaaacgacagccagcgagcccgagaaggtcgaaggtcgtcaa
tgtccgaaatgtgattcggatttaatcttccgaaccggccgctatggcaaatttattggt
tgcagcagttatccaaaatgtaagcatattgagtctctggagcagccgactaacaccggg
gttgattgcccgcaatgtaagaaaggcgaaatcctgacgcgtaaatcccggcgcggcaaa
gtgttttactcttgttcggaatacccaaaatgtgactatgcgctatggaacgagccgctg
aatgaggcgtgtccaaactgtgaatggcccatcctgaccttaaagacaacaaagagcaaa
gggactgaaaaggtctgcccacaaaaagactgtggttttagtgaaaaggtagagtctgtc
tag
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