Methylophaga frappieri: Q7C_2175
Help
Entry
Q7C_2175 CDS
T02056
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mec
Methylophaga frappieri
Pathway
mec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q7C_2175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mec03019
]
Q7C_2175
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_2175
Enzymes [BR:
mec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7C_2175
Messenger RNA biogenesis [BR:
mec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q7C_2175
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q7C_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
HTH_40
Helicase_C
RecQ_Zn_bind
ResIII
HTH_29
DUF3613
Motif
Other DBs
NCBI-ProteinID:
AFJ03311
UniProt:
I1YK68
LinkDB
All DBs
Position
complement(2168268..2170394)
Genome browser
AA seq
708 aa
AA seq
DB search
MDINGQTAQEVLQNVFGYDQFRHNQAAIVEQVINGGDALVLMPTGGGKSLCYQIPALVRP
GTAVVVSPLIALMQDQVVALQELGIQAAFLNSSLSINEMNAVEFQLEAGEIDLLYVAPER
LLSPRMLSLLDRLTISLFAIDEAHCVSQWGHDFRPEYQQLRILHERFPRIPRIALTATAD
KRTRGEIIEQLNLQQAEVYLNSFDRNNIFYSIAEARQARQQLWQFIESQHANDAGIVYCL
SRKKVEATADWLQQQGRTALPYHAGLSAELRAHTQQRFLREEGVIIVATIAFGMGIDKPD
VRFVAHLNLPKNIEAYYQETGRAGRDGLPANAWMAYGLQDVITLRQFMQDSDAPEMVKRV
EHHKLEAMLGLCELITCRRHALLAYFDEDAPQKCGQCDNCVNPPEQFDATEIAQKALSCV
FRTGQRFGVNYLIDVLLGNEDERIKHNQHDQISTFAIGSELNATQWRGIFRQLVATGYLD
IDINRYGALRLTEKCRALLHGKQTLHLRKQQQKQAAAKTGKKKTTVRPQDEALWEALRTL
RSDIAKENGVPPYVIFHDSTLLEMCQYRPADMDAMQRIAGIGKQKLDNYGSAFLAVIAKH
PLSELLNNRLRDTVNLTLLMHEQGLNPEQIARNRALKVSTVYSHLSDGIEAGLLDAKQVL
QLTDAEYDEIATTIADLGDQADSLKPIYQALDEHYDYGVIRCVKAALL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggatattaacggacaaacggcacaggaagtgctgcaaaacgtctttggttacgaccaa
ttccgccataatcaggccgccattgtcgaacaggtgatcaacggtggcgatgcgctggta
ttgatgcccaccggcggcggtaagtcgctttgctatcaaatccccgctttggttcgcccc
ggcaccgccgtggtggtctctcccctgattgcactgatgcaggatcaggtagtggctttg
caggaactcggcattcaggcggcgtttctaaattccagcctgtcaatcaatgagatgaat
gcggtagagtttcagctcgaggctggcgagattgatctgttgtacgtggcgccggagcgg
ctgctgagcccgcgcatgctgagcctgctggatcgactgactatttccctgtttgccatt
gatgaagcccactgcgtatcccagtgggggcatgactttcgccctgaatatcagcaactg
cgcattctgcatgaacgtttcccccgcattccacgcatcgcgctgacggccaccgctgac
aagcgcacccgcggcgagattatcgaacaacttaatctgcagcaggccgaggtctacctc
aacagcttcgaccgcaacaatattttctactccattgccgaagcccgtcaggcccggcag
cagttatggcagtttatcgagagtcagcatgccaatgacgccggtattgtttattgcctg
tcgcgcaaaaaagtcgaggctacggccgactggctgcaacagcagggccgcaccgctctg
ccctatcatgccgggttatcggccgagttacgggctcatacccagcaacgctttttgcgc
gaggaaggcgtgattatcgtggccactattgccttcggtatgggcattgataaacctgat
gtgcgctttgtggcgcatctgaatttgcccaagaatatcgaggcttattaccaggaaacc
ggccgcgccggtcgtgacggtctgcccgccaacgcctggatggcctacggtctgcaggat
gtgattacgctgcgccagtttatgcaggactccgatgcgccggagatggttaaacgcgtc
gagcatcacaagttggaagcgatgctgggtttatgcgaactgattacctgccgccgccat
gccctgctcgcttactttgacgaggatgccccgcaaaaatgcggtcagtgcgataactgc
gtcaatccaccggaacagtttgatgccaccgaaatcgcccaaaaagccttgtcctgcgtg
tttcgcaccggccagcgtttcggcgttaattacctgattgatgttttgctgggcaatgaa
gacgagcgcatcaaacacaatcagcatgatcaaatcagcacctttgctataggcagcgag
ctgaatgccacgcagtggcgggggatattccgacaactggtggcgaccggctacctggat
attgatatcaaccgatacggggcgttgcgtttaaccgaaaagtgccgggcattattacat
ggcaagcagaccctgcatttacgtaaacagcagcaaaaacaggcggctgccaaaaccggc
aagaaaaaaacaacggtgcgccctcaggatgaagcgctgtgggaagccttgcgaacgcta
cgctcagatatcgctaaggagaatggcgtaccaccctatgtgattttccatgattcgacg
ctgctggaaatgtgccagtaccggcctgccgatatggatgccatgcagcgtattgccggg
atcggcaagcaaaagctcgataactacggctcagcttttttagctgttattgcaaaacat
ccactctctgaactacttaataaccgactgcgagataccgttaacctgacgttactgatg
catgagcaaggtttaaatcccgaacaaatagcgcgtaatcgggcgttaaaagtgagtacg
gtgtatagccatttatcagatgggattgaagctggactgcttgatgccaaacaagtttta
caactaaccgatgcagaatatgacgaaatcgccaccactattgccgatctcggcgatcaa
gctgacagtttaaaacccatctatcaagcgctggatgaacattatgattatggtgtcatt
cgctgtgtcaaagcggctttgctttaa
DBGET
integrated database retrieval system
