KEGG   Methylophaga frappieri: Q7C_2708
Entry
Q7C_2708          CDS       T02056                                 
Name
(GenBank) Conjugative transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
mec  Methylophaga frappieri
Pathway
mec02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mec00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q7C_2708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mec02044]
    Q7C_2708
Enzymes [BR:mec01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Q7C_2708
Secretion system [BR:mec02044]
 Type IV secretion system
  Trb secretion system protein
   Q7C_2708
SSDB
Motif
Pfam: T2SSE FtsK_SpoIIIE AAA_16 AAA_19 DUF87 AAA_29 ResIII AAA_7 nSTAND3 PduV-EutP DEAD GTP_EFTU TrwB_AAD_bind ABC_tran TsaE Bac_DnaA MMR_HSR1 Septin Mg_chelatase P-loop_TraG AAA_30 AAA_22 AAA RsgA_GTPase Dynamin_N AAA_23 cobW NACHT ABC_ATPase Zeta_toxin UvrD-helicase AAA_10 AAA_28 PhoH ORC-CDC6-like ATP_bind_1 nSTAND1 Pox_A32 Adeno_IVa2 DUF815 Sigma54_activat AIG1 IstB_IS21 PIF1 ATPase_2 NB-ARC Viral_helicase1 G-alpha
Other DBs
NCBI-ProteinID: AFJ03828
UniProt: I1YLN5
LinkDB
Position
unnamed:6278..7237
AA seq 319 aa
MQQKDATGSIKDRAKRKLERDIGPELLQALNDSKTVELMLNADGKVWIERLGEAMQCIGT
LRPAQAQAIIETIAGYHGKEVTRSKPILEGEFPLDGSRFAGQLPPVVPAPTFAIRKKAVA
IFTLDQYVENGIMTAAQKHVLVEAVAAHRNILVIGGTGSGKTTLVNAIINEMVITDPTER
VFIIEDTGEIQCAAENHVQYHTSLDVSMTALLKTTLRMRPDRILVGEVRGAEALDLLDAW
NTGHEGGAATLHANNANAGLARLRSLITRNPAAPAEIEPLIGEVVHIVVHIARTPEGRRI
QEILEVSGYSDGQYITKSL
NT seq 960 nt   +upstreamnt  +downstreamnt
atgcaacagaaagacgcaaccggctccattaaggaccgggccaaaagaaagttagagcgg
gatattgggcctgagcttctacaggctctgaacgactctaagacggttgagcttatgctc
aacgcagacggtaaagtttggattgagcgtctaggtgaggcgatgcagtgcatcgggacg
cttagaccggctcaagcccaagcgattatcgagacgattgccggttatcacggcaaggaa
gtcacccgaagcaagcccatccttgagggggagtttccccttgatggttcacgtttcgca
ggccagctacctcctgtagttccggcccctaccttcgccattcgtaagaaagccgttgcg
atcttcaccctggatcagtacgtggaaaacggcattatgaccgccgcccaaaaacacgtc
ctggttgaagccgtggcagcacaccgaaacattctcgtcatcggcggcaccggctcaggc
aagaccacactggttaacgccattatcaacgaaatggtgattaccgatcccaccgagcgg
gttttcatcattgaggacacaggcgaaatccagtgcgccgctgaaaaccacgtccagtac
cacacaagccttgacgtctccatgacggcactgctgaaaacaactttgcgcatgaggccc
gaccgcatcctggtcggtgaagtgcgcggagcggaagccttggaccttctcgacgcctgg
aacaccgggcatgagggcggcgctgcaacactgcacgccaacaacgctaacgctggcctg
gctcgcttgcggtcgctgattactcgtaatccagcggctccagccgagattgaaccgcta
attggcgaggtggttcacatcgttgttcatatcgccagaaccccggaaggccgccgcatc
caggaaatcctagaggtttccggttacagcgatggtcagtacatcaccaaatccctttaa

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