KEGG   Methylophaga frappieri: Q7C_543
Entry
Q7C_543           CDS       T02056                                 
Name
(GenBank) IncF plasmid conjugative transfer protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
mec  Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:mec00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mec02044]
    Q7C_543
Secretion system [BR:mec02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   Q7C_543
SSDB
Motif
Pfam: TrwB_AAD_bind TraG-D_C FtsK_SpoIIIE AAA_10 DUF87 T4SS-DNA_transf AAA_22 AAA_29 HerA_C ResIII Zeta_toxin DEAD
Other DBs
NCBI-ProteinID: AFJ01716
UniProt: I1YFM3
LinkDB
Position
complement(580334..582154)
AA seq 606 aa
MKENAYEMPWRTNYEAMAAAGWLVGATGAIAAEMLTELPPEPFWWMTGISSGMALYRLPE
AYRLYKLQKGLKGKPLAFMELSHLQKVMAKHPDELWLGYGFEWDQRHAQRAYEILKRDKQ
TLLNQGHGKQMGSTWIHGVEPKEEDVYQPVGHTEGHTLIVGTTGAGKTRCFDAMITQAIL
RNEAVIIIDPKGDKELKDNAQRACIAAGSPERFVYFHPGFPEHSVRLNPLRNFNRGTEIA
SRIAALIPSETGADPFKAFGQMALNNIVQGLLLTSQRPDLKTLRRFLEGGPEGLVVKAVT
AWGEQVYPNFSVEIKRFTEKANTLAKQAMAMLLFYYERIQPIAANTDLEGLLSMFEHDRT
HYSKMVASLMPVLNMLTSSELGPLLSPIANDVDDSRLITDSGRIINNAQVAYIGLDSLTD
AMVGSAIGSLLLSDLTAVAGDRYNYGVENRPVNIFIDEAAEVVNDPFIQLLNKGRGAKMR
CVIATQTFADFAARTGSEAKARQVLGNINNLIALRVMDAETQQYITDNLPKTRLQYIMQT
QGMSSNSDSPALFTGNHGERLMEEEGDMFPPQLLGQLPNLEYIAKLSGGRVIKGRIPILT
SSTQAA
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgaaagaaaacgcatacgaaatgccctggcgcacgaactatgaggccatggcagcagcg
ggttggctggttggggccactggggcaattgccgcagaaatgctgactgagctaccacct
gagccattttggtggatgacagggatttcctcgggcatggcgttgtaccgcctgcctgag
gcttaccgtctgtataaattgcagaaggggctaaaaggcaaaccattggcttttatggag
ctgtcgcatttgcaaaaggtgatggcaaaacatcctgatgaattgtggttagggtatggc
tttgagtgggatcaacgtcatgctcaacgcgcttatgaaatcttaaagcgggataagcaa
accttgcttaaccaaggtcacggcaaacaaatgggttcgacctggattcatggtgttgag
cccaaagaagaagatgtttaccagccagttggtcacactgaggggcacaccttaattgtc
ggtacgaccggtgccggaaaaacccgatgctttgatgcgatgatcactcaggccattttg
cgcaatgaagctgtgattattattgatcccaagggcgacaaagaacttaaggataatgcg
cagcgagcctgtattgccgccggtagtcctgagcgctttgtgtattttcatccgggtttt
ccagagcattcagtacgtcttaatcccctgagaaactttaaccggggcactgaaattgcc
agccgaattgcggcattaatcccatccgaaaccggtgctgatccatttaaagcctttggc
caaatggcactgaataacatagtgcaaggtctgttgcttacttcacagcgccctgatctg
aaaacactgagacgattcttggaaggtggcccagaaggcttggtagtaaaagccgtcaca
gcctggggggagcaggtgtatccaaactttagtgtggagattaaacgctttactgaaaag
gccaataccttggcaaaacaagccatggcgatgctgcttttttactacgaacgcattcag
cccattgccgccaataccgatttggaaggccttttgagcatgtttgagcatgacagaacc
cactattccaagatggtggcctcattgatgccggtgctcaatatgctcacttcaagtgaa
ttagggccattgctatcacctattgcaaacgatgtggatgacagccggttaattacggat
tctggccgtattatcaacaatgcccaagtggcctatatcgggttggattcattgaccgac
gccatggttggcagcgccattggttcgttgcttttatccgatctcaccgccgtggccggt
gatcgctataactatggtgttgaaaatcgtcccgtaaatatcttcatcgatgaggcggct
gaagtcgtcaacgatcccttcattcaactgctcaacaaaggtcgtggcgcaaaaatgcgt
tgtgtgattgctactcagacatttgctgactttgcagctcgaacaggcagtgaagctaag
gcgcgccaggtgttaggtaacatcaacaacttgatagcccttcgggtgatggatgccgaa
acgcagcaatacattaccgacaatctgcctaagactcggttgcagtacatcatgcaaact
caaggtatgtcgtccaactcggacagccccgcgttatttaccggcaatcatggcgagcgc
ttgatggaggaagaaggtgatatgtttccaccgcagttattaggccagctccccaacctg
gagtacatcgccaagctttcaggcggccgcgtgatcaaaggtcgaattcctattttaacc
agctctacacaggcagcataa

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