Methylophaga frappieri: Q7C_610
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Entry
Q7C_610 CDS
T02056
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mec
Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mec03021
]
Q7C_610
Transcription machinery [BR:
mec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q7C_610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
2Fe-2S_thioredx
UCR_14kD
TPR_4
Motif
Other DBs
NCBI-ProteinID:
AFJ01782
UniProt:
I1YFT9
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Position
668530..669393
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AA seq
287 aa
AA seq
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MTANDVAQYQLATAPIGNLDAYTSLVHQIPVLSAEEEHELATRLQQQGDLDAAQRLVLSH
LRFVVKIARGYSGYGLPVADLIQEGNIGLMKAVKRFDPDKGVRLVSFAVHWIRAEIHEYV
IRNWRIVKIATTKAQRKLFFNLRSAKQRLGWLNQEEVESVAEDLGVTPANVMEMERRLAQ
PDTAFDLPNDTDDEETHFSPSAYLAAPEGSDPSMQLEQDDYADYQQQKLVNALATLDERS
RDIISQRWLQENDKATLHTLADQYQVSAERIRQIESSAMKKLKQLMH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaacgacgttgcgcaatatcaattagctactgcgccgatcggtaatcttgat
gcctacaccagtttggtgcatcaaattccggttttgtctgcggaagaagagcatgagtta
gccacccgcctgcaacagcaaggtgacttggacgcggcacagcgtctggttctgtctcat
ctgcgctttgtcgtcaaaattgctcgaggctacagtggttatggtctgcctgttgctgat
ttgatccaagaaggcaatattggtttgatgaaagccgttaaacgattcgatccagacaaa
ggggttcgcttggtttcctttgccgtgcattggatccgtgctgaaattcatgaatatgtg
attcgcaactggcgcatcgtcaaaattgctacgactaaagctcaacgtaagttgttcttt
aaccttcggagtgcgaaacaacggttaggctggctcaatcaagaagaagttgaatcagtt
gccgaagatctgggtgtgacgccggcaaacgtcatggaaatggaacgtcgcttggctcag
cctgacacggcatttgatttgccgaacgataccgacgacgaagaaacccacttttctcct
tcggcttatctggcagcgccagaaggatccgatccttccatgcaattggagcaggacgat
tatgctgactatcaacagcaaaaactggttaatgctttggcaacgttggatgaacgtagt
cgcgatatcatcagtcagcgatggttacaggaaaacgataaagccacattgcatacattg
gccgatcaatatcaagtatcagcagaacgtattcggcaaattgaaagtagcgccatgaaa
aagctgaaacagcttatgcattaa
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