KEGG   Methylophaga frappieri: Q7C_787
Entry
Q7C_787           CDS       T02056                                 
Name
(GenBank) Signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mec  Methylophaga frappieri
Pathway
mec02024  Quorum sensing
mec03060  Protein export
mec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Q7C_787
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Q7C_787
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q7C_787
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mec02044]
    Q7C_787
Enzymes [BR:mec01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Q7C_787
Secretion system [BR:mec02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Q7C_787
  Eukaryotic Sec-SRP protein
   Q7C_787
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA AAA_16 cobW AAA_33 YqeC AAA_30 6PF2K AAA_24 KTI12 AAA_19 AAA_31 Thymidylate_kin SLFN-g3_helicase T2SSE APS_kinase DnaB_C DO-GTPase1 NACHT ParA ArsA_ATPase Helicase_RecD AAA_14 AAA_28 nSTAND3 TsaE Polo_box_3 P-mevalo_kinase Fe-ADH FliD_C AAA_17
Other DBs
NCBI-ProteinID: AFJ01956
UniProt: I1YGB3
LinkDB
Position
complement(841039..842409)
AA seq 456 aa
MFDSLSDRLGASLKKIRGQGRITEDNIKETLREVRMALLEADVALPVVREFINSVKERAM
GQDVLRSLTPGQVFVKIVNDELTRLMGEANDALDLNHQPPVVVLMAGLQGAGKTTSVAKL
ARFLKERHKKSVMVVSADVYRPAAIQQLKTLAAEVDAKFFASESSQQPVEIARNALAQAK
KEYVDVLIVDTAGRLHIDADMMSEIQAIHAAISPSETLFTVDSMTGQDAANTAQAFNEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFLGVGEKTTALEPFHPDRLVSRILGMGDV
LSLVEEAQRNIDTESAEKLAGKLKSGKNFDLEDFREQLRQMGKMGGIGALMDKLPGMGQI
PDAVKQQANDGQLRKMEAMIDSMTVKERRRPDIIKGSRKKRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMGQKGGMAKLMRSMGGKLPMGGGGLPF
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtttgacagcttgagtgaccggcttggtgcttcactgaagaaaattcgcgggcaaggg
cgcattaccgaagacaacattaaagaaacgcttcgggaagtacgtatggcgcttcttgaa
gccgatgtcgcgctgccagtggttcgtgagtttatcaacagtgttaaagagcgggccatg
gggcaggatgtgctacgcagtctgacgccggggcaagttttcgtcaaaattgtgaatgat
gaactcacccgcctaatgggtgaggctaacgatgcgcttgatttaaatcatcaaccgccc
gtcgttgtccttatggccggcttgcaaggtgctggtaaaacaaccagtgttgctaagttg
gctcggtttctgaaagaaagacataaaaagtcagtcatggtggtgagtgcggacgtttat
cggcctgcagcgattcagcaattgaaaacgctggcggcagaagtagatgctaagtttttc
gccagtgagtcgagccagcagccagtagagattgcacgcaatgccttggcacaggctaaa
aaagaatatgtcgatgtgcttattgtggataccgcaggtcgcctacatattgatgccgac
atgatgagcgaaatccaggctattcatgcggctatctcgccgtcagaaaccttatttaca
gttgatagcatgaccggccaggatgcggcaaataccgcacaagcttttaacgaagcctta
ccattaaccggggtcattctaaccaaaacggatggtgatgctcgggggggcgccgcactg
tcaatccggcatattaccggcaaacccattaagtttctcggtgtcggtgagaaaaccaca
gctttggagccatttcatccagaccgtctggtttcaagaattctcggtatgggcgatgtg
ttatcacttgtcgaagaagcgcaacgaaatatcgacaccgagtctgccgaaaaactggcc
ggcaagttgaaaagtggtaagaactttgaccttgaagattttcgagaacaactgagacag
atgggcaaaatgggaggcataggcgcgttgatggataagttgcccggaatggggcaaata
ccggacgcggtaaagcaacaagccaatgatggccagttacgtaaaatggaggcaatgatt
gactctatgaccgtgaaagaacgtcgacgcccggatatcatcaagggatctcgaaaaaaa
cgtattgcagcgggctctggtacgcaaatacaagatgtgaatcggttgcttaaacaattt
acacaaatgcaaaaaatgatgaaaaaaatggggcaaaaaggcggcatggccaaattaatg
cgtagcatgggcggtaaattacccatgggtggcggtggcttgccattttga

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