Methylophaga frappieri: Q7C_885
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Entry
Q7C_885 CDS
T02056
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mec
Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mec03400
]
Q7C_885
DNA repair and recombination proteins [BR:
mec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q7C_885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_24
AAA_16
PAXNEB
nSTAND3
SLFN-g3_helicase
AAA
NACHT
GvpD_P-loop
DUF7125
AAA_19
Rad51
CobU
DAP3
RecA
AAA_14
NTPase_1
NB-ARC
ABC_tran
AAA_5
Elong_Iki1
DUF6240
AAA_29
DUF7129
GvpD_bR2
PMI_typeI_hel
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AFJ02054
UniProt:
I1YGL1
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All DBs
Position
complement(931395..932783)
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AA seq
462 aa
AA seq
DB search
MAKSKRIYICRECGAQTPQWAGRCNDCGAWNSLTEEVQAGSSAQAMISRHSGYAGQQQPQ
VQRLQEVTSEQAVRWSTGLPELDRVLGGGLVTGSVVLIGGDPGIGKSTLLLQAMAMMAAT
NGLNPLYVSGEESLQQIKLRAERLQLQETPVDLLAETHAEQMIQTATQRQPQVMVIDSIQ
TVFTELLQSAPGTVAQVRESAAQLVRFAKSSGTTMILVGHVTKQGALAGPRVLEHMVDTV
LYFEGDSSTRYRILRAVKNRFGAVNELGVFAMTELGLREVSNPSAIFLSRGEQAVPGSVI
TVIREGSRPMLVEVQALVDESQLGNPRRVTVGLEQNRLAMLLAILHRHGGITCHDQDVFI
NVVGGVKLSETGADLAVLAAVISSLRNKALPHDLVLFGEVGLTGEIRPVQGGEERIRDAA
KHGFKMAIVPTANAPKKPIKEMQVKPVQHLSAAIEMLRSSWL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcgaaacggatttatatttgccgcgagtgtggggcacaaacaccgcaatgg
gccgggcgttgcaatgattgcggtgcctggaacagcctgacagaagaagttcaggcgggt
tcgtctgcacaagcaatgattagtcgacacagtggctatgccggacaacaacagccgcaa
gtacagcgattacaagaagtcacatcagaacaagcggttcgttggtcgacgggattgccg
gaactggatcgggtgctgggtggaggattagtgacaggatccgttgtcttaattggcggc
gatccaggaattggcaaatcaacactattattgcaggccatggcgatgatggctgccaca
aatggtctcaacccactttatgtcagtggtgaagaatcattacagcagattaaacttcgt
gctgaacgacttcaattacaagagacgccagtcgatcttttagcagaaactcatgccgaa
caaatgatccaaacggcaacgcaacgacaaccgcaagtcatggtgattgactctatccag
actgttttcacagaattactgcagtctgctcctggcacggttgcccaagtgcgtgagagc
gcggctcagctggtacgattcgctaaatccagcggtaccacgatgattctggttgggcat
gttaccaaacagggtgcgttggctgggccacgtgttctcgaacatatggtggatacggtt
ttatactttgagggagatagctcgacacggtatcggattcttcgagcagtcaaaaatcgt
ttcggcgccgtcaatgagctgggcgtatttgcgatgactgagctgggtttacgcgaagtc
agcaatccttccgcaatcttcttgtcgcgcggcgagcaggcagtgccaggcagtgtcatc
acggtgattcgggaagggagtagaccaatgctggttgaagtccaggcattggtggatgaa
agccagctgggtaatccacgtcgggtcacagttggtctggaacaaaacaggctggcgatg
ttgttggccattttgcatcgacacggcggcattacctgccatgatcaggatgtgtttatc
aatgtcgtgggtggtgtcaagctgagcgaaactggtgcagaccttgctgtattagccgcc
gtcatctccagcttgaggaataaggcgcttcctcatgatttggttttatttggcgaggtt
gggctaacaggggaaattcgtcccgttcagggtggggaagagcggattcgcgatgcggca
aaacacggttttaagatggcgattgtgccaactgcaaatgcccctaaaaaaccgattaaa
gaaatgcaagtaaagccagttcagcacttatccgcggcgattgaaatgttacgaagtagt
tggctttaa
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