KEGG   Methylophaga frappieri: Q7C_969
Entry
Q7C_969           CDS       T02056                                 
Name
(GenBank) Conjugative transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
mec  Methylophaga frappieri
Pathway
mec02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mec00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q7C_969
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mec02044]
    Q7C_969
Secretion system [BR:mec02044]
 Type IV secretion system
  Trb secretion system protein
   Q7C_969
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: AFJ02138
UniProt: I1YGU5
LinkDB
Position
999816..1001093
AA seq 425 aa
MSQDDIPDLATPQADKVAPEAVALRAHPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQP
QQRGAGESTELYNVDRVSKSEGLDALPTDYSKLPALPPDVPELGPPLPGDLGPAIVNSQQ
PVAATYAAPGYDPNDALRKEEEAAAASSVFFRTGSPQAAPVAQSQVAAAPGFAADAAFDP
LAGGPASTAAQPADPTAVQNRQDQKAAFLAGGSTETRNSGNLQMPTSPYQVMAGTVIAGA
LVTGIKSDLPGDVIATVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRI
ILPDTSSLTLDNLVGTDPAGYAGLEDDVDWHWDRIFAGAIMTTLLGVGAELAAPENRQDG
DRVIIAGRDSLQDTVNQVGQEVTRRNLNIQPTLTIRPGMPVRIVIGRDLVLRPYQPLFFN
KGTSR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgagccaggacgacattcccgaccttgccacgccgcaggcggacaaggtggctcccgag
gcggtggcgctacgcgcccacccgcgcccggttacgcgcttgaaccggcgcacgctggcc
atcctcgctggtggcttgtcggtcggcgtgatgggcgcactgatctggtcgctgcaaccg
cagcaacgcggcgcaggcgaatccaccgagctgtacaacgtggatcgcgtgtccaagtcg
gaagggctggatgcactgccgacggattactcaaagctgccagcgctgccgccagatgtg
ccggagctggggccaccgctgccgggtgatctggggccagccatcgtcaattcgcaacag
ccggtcgccgctacctatgccgcgcccggctacgaccccaacgatgcgctgcgcaaggag
gaagaagcggctgcagcttcgtcggtattcttccgcaccggctccccgcaggctgcgccc
gtggcgcagtcacaagtcgctgccgcaccgggttttgccgccgatgctgctttcgatccg
ctggccggtggcccggcctcgacggcggcacaacctgccgatccgactgccgtgcagaac
cggcaagaccagaaagcggcattcctggctggcggttctacagaaacccgtaattccggc
aatctgcaaatgcccacctcgccgtatcaggtgatggccggaacggtcattgccggggca
ctggtcacgggcatcaagtccgacctgccgggcgacgtgatcgccacggtgacggaaccg
atctatgacacggccactggcaagttcctgctgatcccgcaggggtcgcgcatcctgggc
aagtacaacagccaggtcagctatgggcagagccgcgtgcaggtggtgtggaaccgcatc
atcctgcccgatacgtcttcactcacgctcgacaatttggtcggtactgatccagcaggc
tatgccggtctggaagacgatgtggactggcattgggatcggatctttgcaggtgccatc
atgaccacgctgctgggcgtgggagccgaactggctgcacccgagaaccgccaggatggt
gaccgcgtcatcatcgccgggcgcgacagcttgcaggacactgtgaaccaggtcggccag
gaagtgacccggcgcaacctcaacatccagcccacgctgacgatccggcctggaatgccg
gtgcgtatcgtgatcggccgggatttggtacttcgcccgtaccagccgctgttcttcaat
aaggggacttctcgatga

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