KEGG   Methylomarinum roseum: Q9L42_001320
Entry
Q9L42_001320      CDS       T10194                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
mech  Methylomarinum roseum
Pathway
mech02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mech00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Q9L42_001320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mech02022]
    Q9L42_001320
Two-component system [BR:mech02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Q9L42_001320
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 FleQ AAA_5 AAA_7 MCM VpsR BRCA2DBD_OB2
Other DBs
NCBI-ProteinID: XBS20800
UniProt: A0AAU7NUU0
LinkDB
Position
complement(217058..218422)
AA seq 454 aa
MSKQEPYILVVDDEQDIRQLVSEILEDEGYQVAMAENATVARALKQECQPCLILLDIWMP
DSDGITLLKEWVAEDDALCPVIMMSGHASVESAVEATRLGAYDFLEKPLSLAKLLLTVER
ALEASHLQQENAGLKQQLMLGVEPIGKSAVVERAKDQIKRLAQHDARVLFVGEAGVGKEM
YARYLHNNSARRDGPFVDVSVGSIAPENSAVEFFGREDGGGKIYRGLLEQAHGGTLFLGE
ISGMDQETQARLLSALESSSFLRVGGSESVRVDVRVLSSTRMSLEEEVSSGRFRQDLYYL
LNVVTLEIQPLREHSEDVPGLLNYYVDHFVAQEKLPFRKFSMAAQNYLRNYSWPGNVREL
KNLVQRLMILGAGDDIELDEVKDALGSFAEEPVLTGVVPEFFNLPLKEAREHFEKSYLEY
HFEKNGGSVAKLAAAIGMERTHLYRKLHALKIKL
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgagtaaacaggaaccctatatattggttgtcgatgatgaacaggatattcgtcagtta
gtgtcggaaattctcgaagacgagggctatcaggtggcgatggctgaaaacgccacggtg
gccagggcgctgaaacaggaatgtcagccttgtctgatcctgctggatatttggatgccg
gatagcgatgggatcaccttgctgaaagaatgggtggccgaggacgacgccttatgtcct
gtgatcatgatgtctggccatgcctcggtggaatcggcagtggaggcgactcggctggga
gcctatgactttctggaaaagcccctgtcattggcgaaattgttgttgacggtcgaacgg
gccttggaagccagtcatttgcagcaagaaaacgccggtctcaaacagcaattgatgctg
ggcgtcgaaccgatcggtaagagcgccgtcgtcgaaagagccaaggatcagatcaaacgc
ctggctcagcatgatgcccgggtattgtttgtcggcgaggcaggcgtgggcaaggagatg
tatgcccgctatctgcataataacagcgcacgccgcgatggcccgtttgtcgatgtctcg
gtcggcagtatcgcaccggaaaattcggcggtcgaatttttcggtcgcgaggatggtggc
ggtaaaatttatcgcggtctgctggagcaggcccatggcggaacgctgtttttaggcgaa
atatccggcatggatcaggaaacacaggcaagactgttgagcgcgctggaatccagctcc
tttttgcgcgtcggcggcagtgagtcggtgcgcgtcgacgtacgggtgttatcgtcgacc
cggatgagtctggaagaagaggtgagcagtggccggttcaggcaggatctgtattatctg
ctcaatgtcgtcaccctggaaattcagccgttgcgtgaacatagcgaggacgtaccgggc
ttgctgaattactatgtcgaccattttgtcgcccaggaaaagttgccgttcagaaaattt
tcgatggccgcgcaaaactatctgcgcaattacagttggccgggaaatgtgcgtgaattg
aagaatctggtgcagcgtttgatgatcttgggtgccggcgacgacatcgagctggacgag
gtcaaggatgcgctgggctcttttgccgaagagcctgtattgaccggcgtggtgccggaa
ttttttaacttgccgttaaaggaagccagggagcattttgaaaaatcctatctggaatat
catttcgaaaaaaatggcggcagcgtcgccaaattggccgcggcgataggcatggagcgt
acgcatttatatcgtaagctccatgcattgaagatcaaattgtaa

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