Methylomarinum roseum: Q9L42_003805
Help
Entry
Q9L42_003805 CDS
T10194
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mech Methylomarinum roseum
Pathway
mech03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9L42_003805 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mech03019
]
Q9L42_003805 (rhlB)
Enzymes [BR:
mech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q9L42_003805 (rhlB)
Messenger RNA biogenesis [BR:
mech03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q9L42_003805 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Thioredoxin_8
SNF2-rel_dom
AAA_22
AAA_19
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XBS21259
UniProt:
A0AAU7NW86
LinkDB
All DBs
Position
753228..754508
Genome browser
AA seq
426 aa
AA seq
DB search
MKKSHLTETRFSNLELSDSIIKGLKDAGFINCTPIQEKSLPLSLRGKDIAGQAQTGTGKT
ATFLLAAFQHLINDDSEKIKNPRALIVAPTRELAIQIHKDAVQLSSYLNLRFALIYGGTD
YKKQLDKIKSNVDIIIGTPGRIIDFYKQNAFTLNNIQVMVLDEADRMFDLGFIKDIRYLL
RRMPPPEKRLNMLFSATMSYKVTELAYEHMNNPVVVKIETEEVTSKSIKQIAYCPANEQK
IPLLLGLLKQHQPQRSIVFVNTKRSAEQLNNYLQANGYKTALLSGDVPQDMRQRLLNDFQ
ESKLTLMIATDVAARGLHIPDVSHVFNYDLPQDVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIEAYIGEKIPVQSISEELLAKDIKQPTSRPPRKPSQDKRTGKPRRKPSRPPAS
APESPQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcacatttgaccgaaacacgcttcagcaacctggaactttcggattccatc
ataaaaggcttgaaagatgctggctttatcaactgtacgccgatacaggaaaagtctttg
ccgttgtcgctcaggggcaaggacatcgccggtcaggcgcaaaccggaaccggtaaaacc
gcgaccttcctgctggcggcctttcaacatttaatcaatgatgatagcgagaagataaaa
aatccccgggctttgattgtggcgccgactcgagagctggccatccagattcataaggac
gccgttcagttaagttcttacctaaatcttaggttcgcactaatatatgggggcaccgat
tacaaaaaacaactggataagatcaagtccaatgtcgatattattatcggcacgccgggc
cgcattatcgatttttacaagcaaaacgccttcacgttgaacaacatccaggtcatggtg
ctggacgaagcggaccggatgttcgatctcggtttcatcaaggatatccgctatctgctg
cgccgcatgccgccgcccgagaaacgcctgaatatgctgttttcggcgaccatgtcatac
aaggtcaccgaattggcctatgagcacatgaacaacccggtcgtggtcaagatcgagacc
gaggaagtgacctcgaaatcgatcaagcaaatcgcctactgccctgccaatgaacaaaaa
atcccgttgttgttgggtctgctcaaacagcatcaaccccaacgcagcatcgttttcgtc
aataccaaacgcagcgccgagcaattaaacaattatctgcaggccaacggttacaaaacc
gccctgttaagtggcgatgtccctcaagacatgcgtcagcgcctgctcaatgattttcag
gaaagcaagctgacgttgatgatagcgaccgatgtcgccgctcgcggcctgcatattccg
gatgtctcgcatgtattcaattatgatctgccccaggacgtcgaagattacgtgcatcga
atcggcagaacggcgcgtttcggagccagcggtgaggcgatcagctttatctgcgaggaa
tacgcttattcgatgccggatatcgaagcctatatcggtgaaaaaattccggtgcagagc
atctcggaagaattgctggccaaagatatcaagcagccgacaagcaggccgccgcgaaaa
ccctctcaagacaagcgtaccggcaaaccgcggcgcaagcctagccgtccaccggcatca
gctcccgaaagtcctcaatag
DBGET
integrated database retrieval system
