Methylomarinum roseum: Q9L42_006480
Help
Entry
Q9L42_006480 CDS
T10194
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mech Methylomarinum roseum
Pathway
mech03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q9L42_006480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mech03400
]
Q9L42_006480
Enzymes [BR:
mech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Q9L42_006480
DNA repair and recombination proteins [BR:
mech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Q9L42_006480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XBS21766
UniProt:
A0AAU7NXK6
LinkDB
All DBs
Position
complement(1323496..1324269)
Genome browser
AA seq
257 aa
AA seq
DB search
MRIITLNANGIRAAERKGFFQWLRQQNADVVCIQETKAQVEQLKADAFWPTDYHCFYHDA
EKKGYSGVAIYCKKKPCAINEGIGWKKLDAEGRYIEAQFDNLSVISLYLPSGSSGEERQA
IKFNVLDYLLPYLQEIGRNGRDYIICGDWNIAHKEIDLKNWRGNRKNSGFLPEERAWLDR
LFDDKLWFDAFRLINQEAEQYTWWSNRGQAWSKNVGWRIDYQVINKTLRDKIRSTSIYKN
ERFSDHAPLIIDYDYPF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattacgttaaatgccaacggcatccgcgcggccgaaagaaaaggctttttt
caatggctgcgacagcaaaacgccgacgtcgtttgcatccaggaaaccaaggcccaggtc
gaacaactcaaagccgacgccttctggccgacagactatcattgcttttaccatgacgcc
gagaaaaaaggctatagcggcgtcgccatctactgcaaaaaaaagccctgcgcgatcaac
gagggcatcggctggaaaaagctggatgccgagggccgttacatcgaagcacaattcgac
aatttaagcgttatctccctatacctgccttccggctcttccggcgaagaaagacaggcg
attaaattcaacgtactggattatttgctgccttatttacaggaaatcggtcgaaatggc
cgcgactacatcatttgcggcgattggaatatcgctcacaaggagatcgacctgaagaac
tggcgaggcaaccgaaaaaattcaggtttcctgccggaagagcgggcttggctggatcgc
ttattcgacgacaaactctggttcgacgctttccgcctgatcaaccaggaagcagaacaa
tatacgtggtggtccaaccgcggtcaggcttggagcaagaatgtcggttggcgcatcgat
taccaggtgatcaacaagacgctgagggacaaaatccgctcgacgtcgatctataagaat
gaacgcttttccgatcacgccccgttgatcatcgattatgactatccgttctag
DBGET
integrated database retrieval system
