Methylomarinum roseum: Q9L42_007925
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Entry
Q9L42_007925 CDS
T10194
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mech Methylomarinum roseum
Pathway
mech03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9L42_007925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mech03019
]
Q9L42_007925 (recQ)
03400 DNA repair and recombination proteins [BR:
mech03400
]
Q9L42_007925 (recQ)
Enzymes [BR:
mech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q9L42_007925 (recQ)
Messenger RNA biogenesis [BR:
mech03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q9L42_007925 (recQ)
DNA repair and recombination proteins [BR:
mech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q9L42_007925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_35
DUF7599
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XBS22040
UniProt:
A0AAU7NYL4
LinkDB
All DBs
Position
1645585..1647705
Genome browser
AA seq
706 aa
AA seq
DB search
MPQTPLETLNSLFGYESFRGQQQQIIEQVIDGQDVLVLMPTGGGKSLCYQIPALVMDGVG
IVVSPLIALMQDQVSALHQLGVRAAFLNSTLSFDEARRVEQDLLNGELDLLYIAPERLTG
ERTQALFARLKIALFAIDEAHCVSQWGHDFRADYLQLSLLHQQFPDVPRIALTATADERT
RQEIIKRLALEQAQVFISGFDRPNIRYRIIQKQNARQQLLGFIRAEHPGDAGIVYCLSRK
KVEETAKWLNDKGVNALPYHAGMSHELRQSHQHRFLMEEGLVIVATIAFGMGIDKPNVRF
VAHLDLPKSIEAYYQETGRAGRDGLPANAWMAYGLQDVITLRQMLAGSNADELHKRVEYH
KLDAMLALCESIGCRRQTLLAYFGDELQQGCGNCDTCLEPVETWDGTVAAQQALSCIYRT
GQRFGATYLISVLLGKADDRMRSFGHDKQSTFGIGQSLGEKQWRSVFRQLVAKGLVEIDF
EGYGAFKLTETCRPVLRGEQTLMLRKDSLPEKTKRSKAESREFGNQQDQLLWNALRAKRR
EIADEQDVPPYVIFHDATLMEMLEKKPINHQQLAQISGVGERKLELYGDDFLAVIDEFRD
QQGDELNDTVAASVALFRLGYTVEQVARQRELKADTVYNHLAHALEDGAVMLADVMDMPE
QELRRVEAAFLDLPEDKKNALKPVYEQFEGAYSYNILRCIRANLQR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcaaacaccgttggaaacactgaattcgttattcggttacgaaagctttagaggg
cagcagcaacagatcatagagcaagtgatcgacggtcaggatgtcctggtgttgatgccg
accggcggcggaaaatctttgtgttatcagattcctgcattggtcatggacggtgtcggc
atcgtcgtatcgccgttgatcgcattgatgcaggatcaggttagcgccttgcatcagcta
ggcgtcagggcggcgttcctaaactcgacgctcagttttgacgaggcgcgccgggtcgag
caggatctgctgaacggcgagctggacttgctctatatcgcgccggagcgcttgactggc
gaacgcactcaggcattgttcgcccgcctcaaaatcgccttgtttgcgatcgatgaggcg
cactgcgtttcccaatggggacatgatttccgcgccgattatttgcagctatccctgttg
catcagcaatttccggacgtgccgcgcattgctctgaccgcaaccgccgatgaaagaacc
cgccaggaaatcatcaaacgcttggccttggagcaggcccaggtgttcatcagcggcttc
gaccggcccaatattcgttaccgcatcatccaaaagcaaaacgcccgtcagcagttgctc
ggctttattcgcgcagaacatccgggcgatgccggcatcgtttattgtttgtcgcgcaag
aaggtcgaggagacggcgaaatggctgaatgacaagggggttaacgccttaccttatcat
gccggcatgagccatgaactgcggcaaagtcatcagcaccgctttctgatggaagaaggc
ctggtcatcgtcgccacgatcgccttcggcatgggcatcgacaagccgaatgtgcgcttt
gtcgcccatctggatctgccgaagagcatcgaagcttattatcaggaaaccggccgggcc
ggacgcgacggtctgccggccaatgcctggatggcttacggcttgcaggatgtgattacg
ttgcgacagatgttggccggttccaatgccgatgagctgcataaacgggtcgaatatcac
aaattggatgcgatgttggctttgtgcgaatcgatcggttgccggcgtcaaaccctgctg
gcttatttcggcgatgaattgcagcaaggctgcggtaactgcgacacctgtctggagccg
gtggagacatgggatggcacggtcgccgcgcaacaggctttgtcgtgcatttatcgcacc
ggtcaacgcttcggcgcgacctatctgattagcgtgctgctgggcaaggccgacgacaga
atgcgcagtttcggtcacgacaaacaatccactttcggcatcggccaaagcctgggagaa
aaacaatggcgctcggtgtttcggcagttggtcgccaagggtttggtggagatcgatttt
gagggctatggcgcgttcaagctgaccgaaacgtgccggccggtgttgcgaggcgaacaa
accctgatgctgcgcaaagacagcctgccggaaaaaacaaaacgcagcaaggcggaaagc
cgggagttcggcaatcagcaagatcagttgttatggaatgcattaagggctaaacgccgg
gaaatcgccgatgaacaagatgttccgccctatgtgatttttcatgacgccacgctgatg
gagatgttggagaaaaaaccgatcaatcatcagcagctggcgcagatttccggggtcggc
gaacgtaagcttgaattgtatggcgacgactttctcgccgtgatcgatgaattccgcgac
cagcagggcgacgaattgaacgataccgtcgccgcaagcgtggcgttgttccggctcggt
tatacggtggagcaggtggcgcggcaacgcgagcttaaagccgacaccgtctacaatcat
ctcgcccatgcgctggaagacggggcggtgatgctggccgatgtcatggacatgccggaa
caggagctccgaagggtggaggccgcatttttggatttgccggaggataagaaaaatgcg
ctgaaaccggtatatgaacagttcgagggtgcctacagctacaatatactgcgctgcatc
cgggccaatttgcagcgctag
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