Methylomarinum roseum: Q9L42_010425
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Entry
Q9L42_010425 CDS
T10194
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mech Methylomarinum roseum
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mech03021
]
Q9L42_010425 (rpoH)
Transcription machinery [BR:
mech03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q9L42_010425 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TPR1-like_2nd
HTH_25
GntR
TrmB
Motif
Other DBs
NCBI-ProteinID:
XBS18792
UniProt:
A0AAU7NP96
LinkDB
All DBs
Position
2227836..2228693
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AA seq
285 aa
AA seq
DB search
MSNALALPVNLSVGTFDSYLNVIGQIPKLTSEQERELALRYRDMGDIEAARELVMSNLRF
VAHVARGYSGYGLPLADIMQEGNVGLMKAVKRFDPDIGVRLVSFAVHWIRAEIHEYVIKN
WRIVKVATTKAQRKLFFNLRKSKAGLGWLSKDDAEAIAENLDVDIKTVYEMEKRLDSRDM
AFDLSTDETSEEHSSAPATYLEQQGADPALLLENADWKGHKEDLLTTAMAELDERSQDIL
ASRWLADEKATLHQLAERYQVSAERIRQLEKNAMKKLKAAVVLEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcattagctttaccagtcaacttatcagtcggaacctttgattcctatctg
aatgtgatcggtcagataccgaaattgacgtccgaacaggagcgtgagcttgcgcttcgt
tacagagatatgggggatattgaggcggctcgtgaactggtaatgtcaaatttgcgtttt
gtcgctcatgtcgccagaggatatagcggttacggtctgccgttggccgatatcatgcag
gaaggcaatgtcggcttgatgaaggcggtgaaacgctttgatcccgatatcggagtacgg
cttgtttctttcgccgtgcattggatcagagccgaaattcatgaatatgtcattaaaaat
tggcgcatcgtcaaggtcgcgacgacgaaggcgcagcgaaagctgttcttcaatctgcgc
aaatccaaagccggcctaggctggctgtccaaagatgacgccgaagcgattgcggaaaac
ctcgatgtcgatattaaaaccgtctatgagatggaaaagcgtctcgatagccgtgatatg
gcgttcgatctgtcgaccgatgagactagcgaagaacatagttcggcgccggccacttat
ctggaacaacaaggcgccgatccggccttgctgctggaaaatgccgattggaaagggcat
aaagaagatttattgaccacggcgatggccgaattggatgagcgtagtcaggatattctg
gcgagtcgttggctggccgacgaaaaagcgaccctgcatcagttagcggaacgttatcag
gtttccgccgaacgcatcaggcaattggaaaagaacgcgatgaaaaaactgaaggcggcg
gtggttttggaagcctga
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