Methylomarinum roseum: Q9L42_011645
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Entry
Q9L42_011645 CDS
T10194
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mech Methylomarinum roseum
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mech03009
]
Q9L42_011645 (rlmD)
Enzymes [BR:
mech01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Q9L42_011645 (rlmD)
Ribosome biogenesis [BR:
mech03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q9L42_011645 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
TRM5-TYW2_MTfase
TRAM
MTS
Methyltransf_25
PCMT
Methyltransf_15
Cons_hypoth95
Methyltransf_11
Methyltransf_23
PrmA
N6_N4_Mtase
DOT1
Methyltr_RsmB-F
Methyltransf_4
FtsJ
CMAS
Motif
Other DBs
NCBI-ProteinID:
XBS19025
UniProt:
A0AAU7NPZ7
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All DBs
Position
2512840..2514174
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AA seq
444 aa
AA seq
DB search
MARRRVRKKKLPENPVKVTIESLSHDGRGVAHVDGKVVFIDEALPGEELEFIYTDNRRDY
AEGKVATLLTRSEHRVEPACPHFGVCGGCSFQHVDDAEQIHFKEDLLQEQFRRIGKVEIP
KIWEPLTGPHWGYRSKARMGVKYVAKKGRVLVGFRERRNPFLAEIESCKVMHPIVGEKLM
DLSAMIGKLTIKDKIPQIEVAIGEQACVLAFRVLEAPTAEDRQIMSDFGKEHGISICLQL
KGPDTIMPIPGDAEVTPGYRLPDQQVAFKFRPAMFTQVNYDINRKMVNRAIEALELNEND
NVLDLFCGLGNFTLPMATRAGHVVGVEADLPLVKHARENARLNRLDNVDFYVADLSKDVS
EQEWSRQRFNKVLLDPSRAGASEVLHNFKHWRPERIVYVSCNPSTLARDAGILVNELDYK
LIKAGVMDMFPQTAHVESIALFER
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagaagagtcagaaagaagaaattaccggaaaacccggttaaagtcaccatc
gaatccttatcgcatgacggacgcggcgtcgcgcatgtggacggcaaagtggtcttcatc
gatgaagccttacccggcgaagaattggaattcatctacaccgacaatcgccgcgattat
gccgagggcaaggtggccacattattgactcgctcggagcatcgtgttgaaccggcctgc
ccgcatttcggcgtctgtggcggctgcagctttcagcatgtcgatgacgccgaacagatt
cacttcaaggaggatttgctgcaggaacaatttcgacgtatcggcaaggtggaaattccc
aagatctgggagccgttgaccggcccgcattggggataccgaagcaaagcccgcatgggg
gttaaatatgtggcgaaaaaaggccgggtattggtcggttttcgcgaacgccgcaatccg
tttctggccgaaatcgaaagctgcaaggtcatgcatccgatcgtcggcgaaaagctgatg
gacttgtcggcgatgatcggaaaactgactatcaaggacaaaattccccagatagaagtt
gcgatcggtgagcaggcgtgcgtgctggcattccgggtgctggaggcgccgaccgcggaa
gacaggcaaatcatgagtgacttcggtaaggagcacggcatcagcatctgtctccaactt
aaagggccggatacgatcatgccgataccgggagacgcggaggtgacgcccggctatcgc
ttgccggatcaacaggtggcgttcaagtttcgtccggcgatgttcacccaggtcaattac
gatatcaatcgtaaaatggtgaatcgagccatcgaggccttggaactgaacgaaaacgac
aatgtgctggacctgttctgcggcctcggcaatttcaccttaccgatggcgacccgggca
ggacatgtggtcggtgtcgaagccgatctgccgctggtcaagcatgcccgagaaaatgcc
cgtttgaatcgattggacaatgtcgatttctatgttgccgatttgagcaaagatgtcagt
gagcaagaatggagtcgtcaacgattcaacaaggtgttgctcgatccttcccgggccggc
gcctcggaggtcttgcataatttcaagcactggcggccggaacgtatcgtctatgtatcc
tgtaatccgtcgaccttggccagggatgccggcattctggtcaatgaactcgattataag
ctgatcaaggccggggttatggatatgtttccgcagaccgcacacgtggaatcgattgcg
ttgttcgagcgatga
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